Gene: Potri.011G109300 (Populus trichocarpa)

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Gene Identifier
Potri.011G109300
Transcript Identifier
Potri.011G109300.1
Gene Type
Coding gene
Location
Chr11 : 13371260-13377114 : positive

Family

Gene family
HOM04M000326
(331 genes in 29 species)
specific family
Subfamily
ORTHO04M000228
(315 genes in 29 species)
specific family
Duplication type
Block duplicate

Descriptions

No default description found ...
Description of best ortholog(s):

Identifiers

Type Value
aliasPOPTR_0011s11060
aliasPOPTR_0011s11070
idPotri.011G109300.v3.1
pacid37240080
tidPotri.011G109300.1.v3.1
tidPotri.011G109300.1

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0009620 IEAPLAZA Integrative Orthologyresponse to fungusAT1G53320
GO:0009555 IEAPLAZA Integrative Orthologypollen developmentAT1G53320
GO:0006355 IEAPLAZA Integrative Orthologyregulation of transcription, DNA-templatedAT1G53320

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0005515 IEAInterProprotein binding
GO:0044212 IEAPLAZA Integrative Orthologytranscription regulatory region DNA bindingAT1G53320

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0009536 IEAPLAZA Integrative OrthologyplastidAT1G53320
GO:0005886 IEAPLAZA Integrative Orthologyplasma membraneAT1G53320
GO:0005829 IEAPLAZA Integrative OrthologycytosolAT1G53320
GO:0005634 IEAPLAZA Integrative OrthologynucleusAT1G53320

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
Show redundant parents:  
 
InterPro Description
IPR000007Tubby, C-terminal
IPR001810F-box domain
IPR018066Tubby, C-terminal, conserved site
IPR025659Tubby C-terminal-like domain

Mapman id Description
15.5.21.RNA biosynthesis.transcriptional regulation.transcription factor (TUB)
No SignalP domains detected for this gene.