Gene: Potri.011G101000 (Populus trichocarpa)

Overview top

Gene Identifier
Potri.011G101000
Transcript Identifier
Potri.011G101000.4
Gene Type
Coding gene
Location
Chr11 : 12332697-12337547 : positive

Family

Gene family
HOM04M000461
(251 genes in 28 species)
specific family
Subfamily
ORTHO04M000640
(165 genes in 28 species)
specific family
Duplication type
Tandem duplicate   and   Block duplicate

Descriptions

Description
CCAAT-binding transcription factor (CBF-B/NF-YA) family protein; [ co-ortholog (2of2) of At1g30500, At2g34720, ]

Identifiers

Type Value
aliaseugene3.02360004
aliasPOPTR_0011s10080
idPotri.011G101000.v3.1
pacid37241512
tidPotri.011G101000.4.v3.1
tidPotri.011G101000.4

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0006355 IEAInterProregulation of transcription, DNA-templated
GO:0048510 IEAPLAZA Integrative Orthologyregulation of timing of transition from vegetative to reproductive phaseAT2G34720
GO:0045892 IEAPLAZA Integrative Orthologynegative regulation of transcription, DNA-templatedAT2G34720

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0003700 IEAInterProtranscription factor activity, sequence-specific DNA binding
GO:0003677 IEAInterProDNA binding

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0016602 IEAInterProCCAAT-binding factor complex
GO:0005634 IEAPLAZA Integrative OrthologynucleusAT2G34720

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
Show redundant parents:  
 
InterPro Description
IPR001289Nuclear transcription factor Y subunit A
IPR018362CCAAT-binding factor, conserved site

Mapman id Description
15.5.51.1.RNA biosynthesis.transcriptional regulation.NF-Y transcription factor complex.component NF-YA
No SignalP domains detected for this gene.