Gene: Potri.011G065900 (Populus trichocarpa)

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Gene Identifier
Potri.011G065900
Transcript Identifier
Potri.011G065900.2
Gene Type
Coding gene
Location
Chr11 : 6039572-6040057 : negative

Family

Gene family
HOM04M000093
(903 genes in 29 species)
specific family
Subfamily
ORTHO04M000040
(877 genes in 29 species)
specific family
Duplication type
Block duplicate

Descriptions

No default description found ...
Description of best ortholog(s):

Identifiers

Type Value
aliasPOPTR_0011s07400
idPotri.011G065900.v3.1
pacid37239858
tidPotri.011G065900.2.v3.1
tidPotri.011G065900.2

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0006355 IEAInterProregulation of transcription, DNA-templated
GO:0048510 IEAPLAZA Integrative Orthologyregulation of timing of transition from vegetative to reproductive phaseAT5G62430
GO:0010214 IEAPLAZA Integrative Orthologyseed coat developmentAT1G29160
GO:0045892 IEAPLAZA Integrative Orthologynegative regulation of transcription, DNA-templatedAT5G62430
GO:0009704 IEAPLAZA Integrative Orthologyde-etiolationAT5G62430
GO:0008219 IEAPLAZA Integrative Orthologycell deathAT5G62430
GO:0009414 IEAPLAZA Integrative Orthologyresponse to water deprivationAT3G47500
GO:0009658 IEAPLAZA Integrative Orthologychloroplast organizationAT5G62430
GO:1902455 IEAPLAZA Integrative Orthologynegative regulation of stem cell population maintenanceAT2G34140
GO:1904216 IEAPLAZA Integrative Orthologypositive regulation of protein import into chloroplast stromaAT5G62430
GO:0009793 IEAPLAZA Integrative Orthologyembryo development ending in seed dormancyAT5G62430

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0003677 IEAInterProDNA binding
GO:0005515 IEAPLAZA Integrative Orthologyprotein bindingAT5G62430
GO:0044183 IEAPLAZA Integrative Orthologyprotein binding involved in protein foldingAT5G62430
GO:0003700 IEAPLAZA Integrative Orthologytranscription factor activity, sequence-specific DNA bindingAT5G62430
GO:0044212 IEAPLAZA Integrative Orthologytranscription regulatory region DNA bindingAT1G29160

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0055035 IEAPLAZA Integrative Orthologyplastid thylakoid membraneAT5G62430
GO:0005739 IEAPLAZA Integrative OrthologymitochondrionAT5G62430
GO:0005634 IEAPLAZA Integrative OrthologynucleusAT5G62430
GO:0005886 IEAPLAZA Integrative Orthologyplasma membraneAT3G47500
GO:0009941 IEAPLAZA Integrative Orthologychloroplast envelopeAT5G62430
GO:0005768 IEAPLAZA Integrative OrthologyendosomeAT3G47500
GO:0005802 IEAPLAZA Integrative Orthologytrans-Golgi networkAT3G47500
GO:0009507 IEAPLAZA Integrative OrthologychloroplastAT5G62430
GO:0009706 IEAPLAZA Integrative Orthologychloroplast inner membraneAT5G62430
GO:0009536 IEAPLAZA Integrative OrthologyplastidAT5G62430
GO:0005794 IEAPLAZA Integrative OrthologyGolgi apparatusAT3G47500
GO:0009534 IEAPLAZA Integrative Orthologychloroplast thylakoidAT5G62430
GO:0009570 IEAPLAZA Integrative Orthologychloroplast stromaAT5G62430

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR003851Zinc finger, Dof-type

Mapman id Description
15.5.1.5.RNA biosynthesis.transcriptional regulation.C2C2 transcription factor superfamily.transcription factor (DOF)
No SignalP domains detected for this gene.