Gene: Potri.011G039700 (Populus trichocarpa)

Overview top

Gene Identifier
Potri.011G039700
Transcript Identifier
Potri.011G039700.1
Gene Type
Coding gene
Location
Chr11 : 3356504-3357061 : positive

Family

Gene family
HOM04M002146
(74 genes in 24 species)
specific family
Duplication type
Block duplicate

Descriptions

No default description found ...
Description of best ortholog(s):

Identifiers

Type Value
aliasPOPTR_0011s03960
idPotri.011G039700.v3.1
pacid37239368
tidPotri.011G039700.1.v3.1
tidPotri.011G039700.1

Toolbox

Explore

Create

View

Browse

 

Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0010224 IEAPLAZA Tree-based Orthologyresponse to UV-BAT3G21890
GO:0010200 IEAPLAZA Tree-based Orthologyresponse to chitinAT3G21150
GO:0010017 IEAPLAZA Tree-based Orthologyred or far-red light signaling pathwayAT3G21150
GO:0045892 IEAPLAZA Tree-based Orthologynegative regulation of transcription, DNA-templatedAT3G21150
GO:0009909 IEAPLAZA Tree-based Orthologyregulation of flower developmentAT3G21890
GO:0009409 IEAPLAZA Tree-based Orthologyresponse to coldAT5G54470
GO:0007623 IEAPLAZA Tree-based Orthologycircadian rhythmAT3G21890
GO:0009785 IEAPLAZA Tree-based Orthologyblue light signaling pathwayAT3G21150
GO:0009555 IEAPLAZA Tree-based Orthologypollen developmentAT5G54470
GO:0006355 IEAPLAZA Integrative Orthologyregulation of transcription, DNA-templatedAT4G27310
GO:0009640 IEAPLAZA Tree-based OrthologyphotomorphogenesisAT3G21150

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0008270 IEAInterProzinc ion binding
GO:0030674 IEAPLAZA Tree-based Orthologyprotein binding, bridgingAT4G15248
GO:0005515 IEAPLAZA Tree-based Orthologyprotein bindingAT3G21150

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005622 IEAInterProintracellular
GO:0005737 IEAPLAZA Tree-based OrthologycytoplasmAT3G21150
GO:0005634 IEAPLAZA Tree-based OrthologynucleusAT4G15248

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
Show redundant parents:  
 
InterPro Description
IPR000315B-box-type zinc finger

Mapman id Description
35.2not assigned.not annotated
No SignalP domains detected for this gene.