Gene: Potri.011G010800 (Populus trichocarpa)

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Gene Identifier
Potri.011G010800
Transcript Identifier
Potri.011G010800.1
Gene Type
Coding gene
Location
Chr11 : 833551-837360 : negative

Family

Gene family
HOM04M001175
(121 genes in 29 species)
specific family
Duplication type
Block duplicate

Descriptions

Description
similar to bromo-adjacent homology (BAH) domain-containing protein; similar to ES43 (Hordeum vulgare) GI:1345528; [ co-ortholog (2of2) of At4g22140, At4g04260, ]

Identifiers

Type Value
aliasPOPTR_0011s01570
aliasestExt_Genewise1_v1.C_LG_XI1484
aliasEBP902
idPotri.011G010800.v3.1
pacid37240322
tidPotri.011G010800.1.v3.1
tidPotri.011G010800.1

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:2000028 IEAPLAZA Integrative Orthologyregulation of photoperiodism, floweringAT4G22140
GO:0009911 IEAPLAZA Integrative Orthologypositive regulation of flower developmentAT4G22140
GO:0009845 IEAPLAZA Integrative Orthologyseed germinationAT4G22140
GO:0006325 IEAPLAZA Integrative Orthologychromatin organizationAT4G22140
GO:0048579 IEAPLAZA Integrative Orthologynegative regulation of long-day photoperiodism, floweringAT4G22140
GO:0006355 IEAPLAZA Integrative Orthologyregulation of transcription, DNA-templatedAT4G22140
GO:0009791 IEAPLAZA Integrative Orthologypost-embryonic developmentAT4G22140
GO:0035067 IEAPLAZA Integrative Orthologynegative regulation of histone acetylationAT4G22140

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0003682 IEAInterProchromatin binding
GO:0000976 IEAPLAZA Integrative Orthologytranscription regulatory region sequence-specific DNA bindingAT4G22140
GO:0035064 IEAPLAZA Integrative Orthologymethylated histone bindingAT4G22140

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005634 IEAPLAZA Integrative OrthologynucleusAT4G22140

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR013083Zinc finger, RING/FYVE/PHD-type
IPR001025Bromo adjacent homology (BAH) domain
IPR019787Zinc finger, PHD-finger
IPR019786Zinc finger, PHD-type, conserved site
IPR001965Zinc finger, PHD-type
IPR011011Zinc finger, FYVE/PHD-type

Mapman id Description
12.3.5.2.1.Chromatin organisation.histone modifications.histone ubiquitination.BAH-EMF1 Polycomb gene silencing complex.component BAH
No SignalP domains detected for this gene.