Gene: Potri.010G093200 (Populus trichocarpa)

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Gene Identifier
Potri.010G093200
Transcript Identifier
Potri.010G093200.1
Gene Type
Coding gene
Location
Chr10 : 11627646-11631622 : negative

Family

Gene family
HOM04M000392
(290 genes in 29 species)
specific family
Subfamily
ORTHO04M002546
(68 genes in 29 species)
specific family
Duplication type
Block duplicate

Descriptions

Description
similar to cullin; putative; similar to Cullin homolog 3 (CUL-3) SP:Q13618; similar to GI:3639052 from (Homo sapiens); [ co-ortholog (2of2) of At1g69670, At1g26830, ]

Identifiers

Type Value
aliaseugene3.00100858
aliasPOPTR_0010s10320
aliasPt-CUL3.2
idPotri.010G093200.v3.1
pacid37222706
tidPotri.010G093200.1.v3.1
tidPotri.010G093200.1

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0006511 IEAInterProubiquitin-dependent protein catabolic process
GO:0009911 IEAPLAZA Integrative Orthologypositive regulation of flower developmentAT1G26830
GO:0009960 IEAPLAZA Integrative Orthologyendosperm developmentAT1G26830
GO:0009793 IEAPLAZA Integrative Orthologyembryo development ending in seed dormancyAT1G26830
GO:0009639 IEAPLAZA Integrative Orthologyresponse to red or far red lightAT1G26830

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0031625 IEAInterProubiquitin protein ligase binding
GO:0005515 IEAPLAZA Integrative Orthologyprotein bindingAT1G26830

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0019005 IEAPLAZA Integrative OrthologySCF ubiquitin ligase complexAT1G26830
GO:0005829 IEAPLAZA Integrative OrthologycytosolAT1G26830
GO:0000151 IEAPLAZA Integrative Orthologyubiquitin ligase complexAT1G26830

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR011991Winged helix-turn-helix DNA-binding domain
IPR001373Cullin, N-terminal
IPR019559Cullin protein, neddylation domain
IPR016158Cullin homology
IPR016159Cullin repeat-like-containing domain

Mapman id Description
19.2.2.8.2.1.Protein homeostasis.ubiquitin-proteasome system.ubiquitin-fold protein conjugation.Cullin-based ubiquitylation complexes.CUL3-BTB E3 ligase complexes.scaffold component CUL3
No SignalP domains detected for this gene.