Gene: Potri.008G069200 (Populus trichocarpa)

Overview top

Gene Identifier
Potri.008G069200
Transcript Identifier
Potri.008G069200.2
Gene Type
Coding gene
Location
Chr08 : 4229267-4233487 : positive

Family

Gene family
HOM04M000365
(308 genes in 29 species)
specific family
Subfamily
ORTHO04M000348
(251 genes in 29 species)
specific family
Duplication type
Block duplicate

Descriptions

Description
PHD finger family protein; PHD finger family protein; [ co-ortholog (1of2) of At3g11200, ]

Identifiers

Type Value
aliasgrail3.0010001701
aliasPOPTR_0008s06920
aliasPOPTR_0008s06910
idPotri.008G069200.v3.1
pacid37271841
tidPotri.008G069200.2.v3.1
tidPotri.008G069200.2

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0006355 IEAInterProregulation of transcription, DNA-templated

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0042393 IEAInterProhistone binding
GO:0043565 IEAPLAZA Integrative Orthologysequence-specific DNA bindingAT5G05610
GO:0044212 IEAPLAZA Integrative Orthologytranscription regulatory region DNA bindingAT5G05610
GO:0035064 IEAPLAZA Integrative Orthologymethylated histone bindingAT5G05610

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005829 IEAPLAZA Integrative OrthologycytosolAT3G11200
GO:0005634 IEAPLAZA Integrative OrthologynucleusAT3G11200

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
Show redundant parents:  
 
InterPro Description
IPR013083Zinc finger, RING/FYVE/PHD-type
IPR019787Zinc finger, PHD-finger
IPR021998Alfin
IPR019786Zinc finger, PHD-type, conserved site
IPR001965Zinc finger, PHD-type
IPR011011Zinc finger, FYVE/PHD-type

Mapman id Description
15.5.8.RNA biosynthesis.transcriptional regulation.transcription factor (Alfin)
No SignalP domains detected for this gene.