Gene: Potri.006G188700 (Populus trichocarpa)

Overview top

Gene Identifier
Potri.006G188700
Transcript Identifier
Potri.006G188700.1
Gene Type
Coding gene
Location
Chr06 : 20334508-20339535 : negative

Family

Gene family
HOM04M000333
(325 genes in 29 species)
specific family
Subfamily
ORTHO04M007410
(34 genes in 29 species)
specific family
Duplication type
Block duplicate

Descriptions

Description
minichromosome maintenance family protein; MCM family protein; similar to SP|P55862|DNA replication licensing factor MCM5 CDC46 (homolog {Xenopus) {laevis} ; [ co-ortholog (1of3) of At2g07690, ]

Identifiers

Type Value
aliasPOPTR_0006s20300
aliasestExt_fgenesh4_pm.C_LG_VI0511
idPotri.006G188700.v3.1
pacid37242828
tidPotri.006G188700.1.v3.1
tidPotri.006G188700.1

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0006270 IEAInterProDNA replication initiation
GO:0006260 IEAInterProDNA replication
GO:0006268 IEAPLAZA Integrative OrthologyDNA unwinding involved in DNA replicationAT2G07690

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0003678 IEAInterProDNA helicase activity
GO:0003682 IEAInterProchromatin binding
GO:0003688 IEAInterProDNA replication origin binding
GO:0005524 IEAInterProATP binding
GO:0003677 IEAInterProDNA binding
GO:0005515 IEAPLAZA Integrative Orthologyprotein bindingAT2G07690

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005634 IEAInterPronucleus
GO:0042555 IEAInterProMCM complex
GO:0000347 IEAPLAZA Integrative OrthologyTHO complexAT2G07690
GO:0005737 IEAPLAZA Integrative OrthologycytoplasmAT2G07690

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
Show redundant parents:  
 
InterPro Description
IPR008048DNA replication licensing factor Mcm
IPR027925MCM N-terminal domain
IPR033762MCM OB domain
IPR001208MCM domain
IPR018525Mini-chromosome maintenance, conserved site
IPR031327Mini-chromosome maintenance protein
IPR012340Nucleic acid-binding, OB-fold
IPR027417P-loop containing nucleoside triphosphate hydrolase

Mapman id Description
13.2.1.2.4.Cell cycle organisation.DNA replication.preinitiation.MCM replicative DNA helicase complex.component MCM5
No SignalP domains detected for this gene.