Gene: Potri.005G001300 (Populus trichocarpa)

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Gene Identifier
Potri.005G001300
Transcript Identifier
Potri.005G001300.1
Gene Type
Coding gene
Location
Chr05 : 69310-70223 : negative

Family

Gene family
HOM04M000070
(1167 genes in 27 species)
specific family
Subfamily
ORTHO04M000048
(804 genes in 27 species)
specific family
Duplication type
Block duplicate

Descriptions

Description
similar to probable rhicadhesin receptor - garden pea (fragment). [ORG:Pisum sativum]; [ co-ortholog (2of2) of Q9S8P4, S42642, CAB65369, At1g09560, ]

Identifiers

Type Value
aliasPt-GER1.1
aliasPOPTR_0005s00310
aliasgw1.131.45.1
idPotri.005G001300.v3.1
pacid37265369
tidPotri.005G001300.1.v3.1
tidPotri.005G001300.1

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0010497 IEAPLAZA Integrative Orthologyplasmodesmata-mediated intercellular transportAT1G09560
GO:2000280 IEAPLAZA Integrative Orthologyregulation of root developmentAT1G09560
GO:0009409 IEAPLAZA Integrative Orthologyresponse to coldAT1G09560

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0045735 IEAInterPronutrient reservoir activity
GO:0030145 IEAInterPromanganese ion binding

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0048046 IEAPLAZA Integrative OrthologyapoplastAT3G05930
GO:0005618 IEAPLAZA Integrative Orthologycell wallAT1G09560
GO:0009506 IEAPLAZA Integrative OrthologyplasmodesmaAT1G09560
GO:0005634 IEAPLAZA Integrative OrthologynucleusAT1G09560

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
Show redundant parents:  
 
InterPro Description
IPR014710RmlC-like jelly roll fold
IPR006045Cupin 1
IPR001929Germin
IPR019780Germin, manganese binding site
IPR011051RmlC-like cupin domain

Mapman id Description
35.1not assigned.annotated
No SignalP domains detected for this gene.