Gene: Potri.004G174400 (Populus trichocarpa)

Overview top

Gene Identifier
Potri.004G174400
Transcript Identifier
Potri.004G174400.1
Gene Type
Coding gene
Location
Chr04 : 19282158-19283055 : negative

Family

Gene family
HOM04M000010
(3187 genes in 28 species)
specific family
Duplication type
Block duplicate

Descriptions

Description
similar to myb family transcription factor (MYB4); similar to Encodes a R2R3 MYB protein which is involved in the response to UV-B. It functions as a repressor of target gene expression. One of its target genes enco; [ ortholog of At4g38620,]

Identifiers

Type Value
aliasMYB221
aliasPOPTR_0004s18020
aliasPt-MYB4.1
aliasestExt_fgenesh4_pg.C_LG_IV1453
idPotri.004G174400.v3.1
pacid37231483
tidPotri.004G174400.1.v3.1
tidPotri.004G174400.1

Toolbox

Explore

Create

View

Browse

 

Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0030154 IBAUniProtcell differentiation
GO:0006357 IBAUniProtregulation of transcription from RNA polymerase II promoter
GO:2000762 IEAPLAZA Integrative Orthologyregulation of phenylpropanoid metabolic processAT4G38620
GO:0010224 IEAPLAZA Integrative Orthologyresponse to UV-BAT4G38620
GO:0009723 IEAPLAZA Integrative Orthologyresponse to ethyleneAT4G34990
GO:0009751 IEAPLAZA Integrative Orthologyresponse to salicylic acidAT4G38620
GO:0046686 IEAPLAZA Integrative Orthologyresponse to cadmium ionAT4G34990
GO:0009753 IEAPLAZA Integrative Orthologyresponse to jasmonic acidAT4G38620
GO:1900384 IEAPLAZA Integrative Orthologyregulation of flavonol biosynthetic processAT2G16720
GO:0009651 IEAPLAZA Integrative Orthologyresponse to salt stressAT4G34990
GO:0045892 IEAPLAZA Integrative Orthologynegative regulation of transcription, DNA-templatedAT4G38620
GO:0009737 IEAPLAZA Integrative Orthologyresponse to abscisic acidAT4G34990
GO:1903086 IEAPLAZA Integrative Orthologynegative regulation of sinapate ester biosynthetic processAT4G38620

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0003677 IEAInterProDNA binding
GO:0000981 IBAUniProtRNA polymerase II transcription factor activity, sequence-specific DNA binding
GO:0043565 IBAUniProtsequence-specific DNA binding
GO:0001135 IBAUniProttranscription factor activity, RNA polymerase II transcription factor recruiting
GO:0044212 IBAUniProttranscription regulatory region DNA binding
GO:0005515 IEAPLAZA Integrative Orthologyprotein bindingAT4G38620

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005634 IBAUniProtnucleus

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
Show redundant parents:  
 
InterPro Description
IPR001005SANT/Myb domain
IPR017930Myb domain
IPR009057Homeobox domain-like

Mapman id Description
15.5.2.1.RNA biosynthesis.transcriptional regulation.MYB transcription factor superfamily.transcription factor (MYB)
No SignalP domains detected for this gene.