Gene: Potri.004G115500 (Populus trichocarpa)

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Gene Identifier
Potri.004G115500
Transcript Identifier
Potri.004G115500.6
Gene Type
Coding gene
Location
Chr04 : 10553571-10560162 : negative

Family

Gene family
HOM04M000038
(1510 genes in 29 species)
specific family
Subfamily
ORTHO04M000013
(1412 genes in 29 species)
specific family
Duplication type
Tandem duplicate   and   Block duplicate

Descriptions

No default description found ...
Description of best ortholog(s):

Identifiers

Type Value
aliasPOPTR_0004s11450
aliasPOPTR_0004s11440
idPotri.004G115500.v3.1
pacid37231813
tidPotri.004G115500.6.v3.1
tidPotri.004G115500.6

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0045944 IEAInterPropositive regulation of transcription from RNA polymerase II promoter
GO:0006355 IEAInterProregulation of transcription, DNA-templated
GO:0048481 IEAPLAZA Integrative Orthologyplant ovule developmentAT5G15800
GO:0009611 IEAPLAZA Integrative Orthologyresponse to woundingAT5G15800
GO:0009644 IEAPLAZA Integrative Orthologyresponse to high light intensityAT5G15800
GO:0009908 IEAPLAZA Integrative Orthologyflower developmentAT5G15800
GO:0071486 IEAPLAZA Integrative Orthologycellular response to high light intensityAT5G15800
GO:0071492 IEAPLAZA Integrative Orthologycellular response to UV-AAT5G15800

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0000977 IEAInterProRNA polymerase II regulatory region sequence-specific DNA binding
GO:0003677 IEAInterProDNA binding
GO:0046983 IEAInterProprotein dimerization activity
GO:0003700 IEAInterProtranscription factor activity, sequence-specific DNA binding
GO:0016168 IEAPLAZA Integrative Orthologychlorophyll bindingAT5G15800
GO:0005515 IEAPLAZA Integrative Orthologyprotein bindingAT5G15800

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005634 IEAInterPronucleus
GO:0009535 IEAPLAZA Integrative Orthologychloroplast thylakoid membraneAT5G15800

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
Show redundant parents:  
 
InterPro Description
IPR033896MADS MEF2-like
IPR002100Transcription factor, MADS-box
IPR002487Transcription factor, K-box

Mapman id Description
15.5.14.RNA biosynthesis.transcriptional regulation.transcription factor (MADS/AGL)
No SignalP domains detected for this gene.