Gene: Potri.004G081300 (Populus trichocarpa)

Overview top

Gene Identifier
Potri.004G081300
Transcript Identifier
Potri.004G081300.1
Gene Type
Coding gene
Location
Chr04 : 6705665-6709442 : negative

Family

Gene family
HOM04M000598
(208 genes in 27 species)
specific family
Subfamily
ORTHO04M000676
(160 genes in 27 species)
specific family
Duplication type
Block duplicate

Descriptions

No default description found ...
Description of best ortholog(s):

Identifiers

Type Value
aliasPOPTR_0004s07940
idPotri.004G081300.v3.1
pacid37231956
tidPotri.004G081300.1.v3.1
tidPotri.004G081300.1

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0005985 IEAInterProsucrose metabolic process
GO:0010267 IEAPLAZA Tree-based Orthologyproduction of ta-siRNAs involved in RNA interferenceAT5G20830
GO:0010228 IEAPLAZA Tree-based Orthologyvegetative to reproductive phase transition of meristemAT5G20830
GO:0009616 IEAPLAZA Tree-based Orthologyvirus induced gene silencingAT5G20830
GO:0009744 IEAPLAZA Tree-based Orthologyresponse to sucroseAT5G20830
GO:0005982 IEAPLAZA Tree-based Orthologystarch metabolic processAT5G49190
GO:0046686 IEAPLAZA Tree-based Orthologyresponse to cadmium ionAT5G20830
GO:0006970 IEAPLAZA Tree-based Orthologyresponse to osmotic stressAT5G20830
GO:0080165 IEAPLAZA Integrative Orthologycallose deposition in phloem sieve plateAT5G37180
GO:0009880 IEAPLAZA Tree-based Orthologyembryonic pattern specificationAT5G20830
GO:0031053 IEAPLAZA Tree-based Orthologyprimary miRNA processingAT5G20830
GO:0010098 IEAPLAZA Tree-based Orthologysuspensor developmentAT4G02280
GO:0010037 IEAPLAZA Tree-based Orthologyresponse to carbon dioxideLOC_Os03g28330
GO:0035279 IEAPLAZA Tree-based OrthologymRNA cleavage involved in gene silencing by miRNAAT5G20830
GO:0010431 IEAPLAZA Tree-based Orthologyseed maturationAT5G49190
GO:2000034 IEAPLAZA Tree-based Orthologyregulation of seed maturationAT5G20830
GO:0010599 IEAPLAZA Tree-based Orthologyproduction of lsiRNA involved in RNA interferenceAT5G20830
GO:0010555 IEAPLAZA Tree-based Orthologyresponse to mannitolAT5G20830
GO:0051262 IEAPLAZA Tree-based Orthologyprotein tetramerizationLOC_Os06g09450
GO:0009908 IEAPLAZA Tree-based Orthologyflower developmentAT5G20830
GO:0001666 IEAPLAZA Tree-based Orthologyresponse to hypoxiaAT5G49190
GO:0009749 IEAPLAZA Tree-based Orthologyresponse to glucoseAT5G20830
GO:0009409 IEAPLAZA Tree-based Orthologyresponse to coldAT5G20830
GO:0009414 IEAPLAZA Tree-based Orthologyresponse to water deprivationAT5G20830
GO:0000911 IEAPLAZA Tree-based Orthologycytokinesis by cell plate formationAT5G20830
GO:0009413 IEAPLAZA Tree-based Orthologyresponse to floodingAT5G20830
GO:0048317 IEAPLAZA Tree-based Orthologyseed morphogenesisAT5G20830
GO:0072708 IEAPLAZA Tree-based Orthologyresponse to sorbitolAT5G20830

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0016157 IEAInterProsucrose synthase activity
GO:0003725 IEAPLAZA Tree-based Orthologydouble-stranded RNA bindingAT5G20830

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0010445 IEAPLAZA Tree-based Orthologynuclear dicing bodyAT5G20830
GO:0016020 IEAPLAZA Tree-based OrthologymembraneAT5G49190
GO:0005618 IEAPLAZA Integrative Orthologycell wallAT5G37180
GO:0005634 IEAPLAZA Tree-based OrthologynucleusAT5G20830
GO:0005886 IEAPLAZA Tree-based Orthologyplasma membraneAT3G43190
GO:0009505 IEAPLAZA Tree-based Orthologyplant-type cell wallAT5G49190
GO:0005829 IEAPLAZA Tree-based OrthologycytosolAT5G49190
GO:0009506 IEAPLAZA Tree-based OrthologyplasmodesmaAT5G20830
GO:0005773 IEAPLAZA Tree-based OrthologyvacuoleAT3G43190

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR000368Sucrose synthase
IPR001296Glycosyl transferase, family 1
IPR012820Sucrose synthase, plant/cyanobacteria

Mapman id Description
3.1.4.2.Carbohydrate metabolism.sucrose metabolism.degradation.sucrose synthase
No SignalP domains detected for this gene.