Gene: Potri.003G159000 (Populus trichocarpa)

Overview top

Gene Identifier
Potri.003G159000
Transcript Identifier
Potri.003G159000.2
Gene Type
Coding gene
Location
Chr03 : 17090170-17091480 : negative

Family

Gene family
HOM04M001289
(112 genes in 29 species)
specific family
Subfamily
ORTHO04M001456
(96 genes in 29 species)
specific family
Duplication type
Block duplicate

Descriptions

Description
similar to Eukaryotic peptide chain release factor subunit 1-2 (eRF1-2) (Eukaryotic release factor 1-2) (Omnipotent suppressor protein 1 homolog 2) (SUP1 homolog 2).; [ co-ortholog (1of3) of At1g12920, At3g26618, ]

Identifiers

Type Value
aliaseugene3.00031284
aliasPOPTR_0003s15730
aliasPt-ERF1.5
idPotri.003G159000.v3.1
pacid37236890
tidPotri.003G159000.2.v3.1
tidPotri.003G159000.2

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0006415 IEAInterProtranslational termination

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0016149 IEAInterProtranslation release factor activity, codon specific
GO:0003747 IEAPLAZA Integrative Orthologytranslation release factor activityAT1G12920

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005737 IEAInterProcytoplasm
GO:0005886 IEAPLAZA Integrative Orthologyplasma membraneAT1G12920
GO:0018444 IEAPLAZA Integrative Orthologytranslation release factor complexAT1G12920
GO:0005829 IEAPLAZA Integrative OrthologycytosolAT1G12920

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
Show redundant parents:  
 
InterPro Description
IPR02906450S ribosomal protein L30e-like
IPR024049Peptide Chain Release Factor eRF1/aRF1, N-terminal
IPR004403Peptide chain release factor eRF1/aRF1
IPR005141eRF1 domain 2
IPR005140eRF1 domain 1/Pelota-like
IPR005142eRF1 domain 3

Mapman id Description
17.3.2.1.1.Protein biosynthesis.mRNA quality control.NMD Nonsense-Mediated Decay.eRF1-eRF3 aberrant mRNA detection complex.component eRF1
No SignalP domains detected for this gene.