Gene: Potri.003G093000 (Populus trichocarpa)

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Gene Identifier
Potri.003G093000
Transcript Identifier
Potri.003G093000.1
Gene Type
Coding gene
Location
Chr03 : 12027691-12029090 : negative

Family

Gene family
HOM04M000286
(363 genes in 27 species)
specific family
Subfamily
ORTHO04M000477
(200 genes in 27 species)
specific family
Duplication type
Block duplicate

Descriptions

Description
similar to senescence-associated protein; putative; similar to senescence-associated protein 5 (Hemerocallis hybrid cultivar) gi|3551954|gb|AAC34855|; [ co-ortholog (2of2) of At5g46700, ]

Identifiers

Type Value
aliasgrail3.0018000201
aliasPOPTR_0003s09180
idPotri.003G093000.v3.1
pacid37235922
tidPotri.003G093000.1.v3.1
tidPotri.003G093000.1

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0010015 IEAPLAZA Integrative Orthologyroot morphogenesisAT5G46700
GO:0010305 IEAPLAZA Integrative Orthologyleaf vascular tissue pattern formationAT5G46700
GO:0048527 IEAPLAZA Tree-based Orthologylateral root developmentAT2G03840
GO:0009933 IEAPLAZA Integrative Orthologymeristem structural organizationAT5G46700
GO:0009934 IEAPLAZA Integrative Orthologyregulation of meristem structural organizationAT5G46700
GO:0009956 IEAPLAZA Integrative Orthologyradial pattern formationAT5G46700
GO:0009554 IEAPLAZA Integrative OrthologymegasporogenesisAT5G46700
GO:0080022 IEAPLAZA Tree-based Orthologyprimary root developmentAT2G03840
GO:0050829 IEAPLAZA Tree-based Orthologydefense response to Gram-negative bacteriumAT2G23810
GO:0035265 IEAPLAZA Tree-based Orthologyorgan growthAT3G12090

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0016021 IEAInterProintegral component of membrane
GO:0016020 IEAPLAZA Tree-based OrthologymembraneAT2G23810
GO:0009506 IEAPLAZA Integrative OrthologyplasmodesmaAT5G46700
GO:0005886 IEAPLAZA Integrative Orthologyplasma membraneAT5G46700
GO:0005794 IEAPLAZA Tree-based OrthologyGolgi apparatusAT2G23810

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR018499Tetraspanin/Peripherin

Mapman id Description
35.1not assigned.annotated
No SignalP domains detected for this gene.