Gene: Potri.002G111600 (Populus trichocarpa)

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Gene Identifier
Potri.002G111600
Transcript Identifier
Potri.002G111600.2
Gene Type
Coding gene
Location
Chr02 : 8310956-8313902 : negative

Family

Gene family
HOM04M001161
(123 genes in 25 species)
specific family

Descriptions

No default description found ...
Description of best ortholog(s):

Identifiers

Type Value
aliaseugene3.00021034
aliasPOPTR_0002s11220
idPotri.002G111600.v3.1
pacid37258651
tidPotri.002G111600.2.v3.1
tidPotri.002G111600.2

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0010048 IEAPLAZA Tree-based Orthologyvernalization responseAT3G24440
GO:0070417 IEAPLAZA Tree-based Orthologycellular response to coldAT5G57380
GO:0010228 IEAPLAZA Tree-based Orthologyvegetative to reproductive phase transition of meristemAT4G30200
GO:0016571 IEAPLAZA Tree-based Orthologyhistone methylationAT3G24440
GO:0051571 IEAPLAZA Tree-based Orthologypositive regulation of histone H3-K4 methylationAT3G24440
GO:0048575 IEAPLAZA Tree-based Orthologyshort-day photoperiodism, floweringAT3G24440
GO:0048587 IEAPLAZA Tree-based Orthologyregulation of short-day photoperiodism, floweringAT4G30200
GO:0009909 IEAPLAZA Tree-based Orthologyregulation of flower developmentAT3G24440
GO:0001666 IEAPLAZA Tree-based Orthologyresponse to hypoxiaAT5G57380
GO:0032922 IEAPLAZA Tree-based Orthologycircadian regulation of gene expressionAT4G30200
GO:0048572 IEAPLAZA Tree-based Orthologyshort-day photoperiodismAT3G24440
GO:0009409 IEAPLAZA Tree-based Orthologyresponse to coldAT3G24440
GO:1900111 IEAPLAZA Tree-based Orthologypositive regulation of histone H3-K9 dimethylationAT4G30200
GO:0061087 IEAPLAZA Tree-based Orthologypositive regulation of histone H3-K27 methylationAT3G24440
GO:0031062 IEAPLAZA Tree-based Orthologypositive regulation of histone methylationAT3G24440
GO:0045814 IEAPLAZA Tree-based Orthologynegative regulation of gene expression, epigeneticAT3G24440

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0005515 IEAPLAZA Tree-based Orthologyprotein bindingAT3G24440
GO:0035064 IEAPLAZA Tree-based Orthologymethylated histone bindingAT4G30200
GO:0042802 IEAPLAZA Tree-based Orthologyidentical protein bindingAT4G30200

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0031519 IEAPLAZA Tree-based OrthologyPcG protein complexAT4G30200
GO:0009506 IEAPLAZA Tree-based OrthologyplasmodesmaAT4G30200
GO:0005634 IEAPLAZA Tree-based OrthologynucleusAT3G24440
GO:0005677 IEAPLAZA Tree-based Orthologychromatin silencing complexAT3G24440
GO:0016607 IEAPLAZA Tree-based Orthologynuclear speckAT3G24440

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR032881Oberon, PHD finger domain

Mapman id Description
12.3.3.1.2.2.Chromatin organisation.histone modifications.histone lysine methylation.PRC2 histone methylation complex.associated protein factors.PRC2-VRN-interacting PHD protein (VIN3|VRN5)
No SignalP domains detected for this gene.