Gene: Potri.002G061600 (Populus trichocarpa)

Overview top

Gene Identifier
Potri.002G061600
Transcript Identifier
Potri.002G061600.19
Gene Type
Coding gene
Location
Chr02 : 4187203-4191633 : negative

Family

Gene family
HOM04M005733
(35 genes in 28 species)
specific family
Duplication type
Block duplicate

Descriptions

Description
tRNA pseudouridine synthase family protein; similar to pseudouridine synthase 3 (Mus musculus) GI:9652099; [ co-ortholog (1of3) of At1g34150, ]

Identifiers

Type Value
aliasPOPTR_0002s06250
aliasestExt_fgenesh4_pg.C_LG_II0574
idPotri.002G061600.v3.1
pacid37258105
tidPotri.002G061600.19.v3.1
tidPotri.002G061600.19

Toolbox

Explore

Create

View

Browse

 

Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0001522 IEAInterPropseudouridine synthesis
GO:0009451 IEAInterProRNA modification

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0003723 IEAInterProRNA binding
GO:0009982 IEAInterPropseudouridine synthase activity

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
Show redundant parents:  
 
InterPro Description
IPR020095Pseudouridine synthase I, TruA, C-terminal
IPR001406Pseudouridine synthase I, TruA
IPR020097Pseudouridine synthase I, TruA, alpha/beta domain
IPR020103Pseudouridine synthase, catalytic domain

Mapman id Description
16.6.3.1.RNA processing.tRNA modification.pseudouridylation.tRNA pseudouridine synthase (TruA)
No SignalP domains detected for this gene.