Gene: Potri.001G387600 (Populus trichocarpa)

Overview top

Gene Identifier
Potri.001G387600
Transcript Identifier
Potri.001G387600.2
Gene Type
Coding gene
Location
Chr01 : 40372765-40377666 : positive

Family

Gene family
HOM04M001221
(118 genes in 29 species)
specific family
Subfamily
ORTHO04M001992
(80 genes in 29 species)
specific family
Duplication type
Block duplicate

Descriptions

Description
similar to protein transport protein sec61; putative; similar to PfSec61 (Plasmodium falciparum) GI:3057044; [ co-ortholog (2of2) of At1g29310, At2g34250, ]

Identifiers

Type Value
aliasPOPTR_0001s39600
aliasestExt_fgenesh4_pg.C_1780025
aliasPOPTR_0001s39590
idPotri.001G387600.v3.1
pacid37276632
tidPotri.001G387600.2.v3.1
tidPotri.001G387600.2

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0015031 IEAInterProprotein transport

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0016020 IEAInterPromembrane
GO:0005886 IEAPLAZA Integrative Orthologyplasma membraneAT1G29310
GO:0005783 IEAPLAZA Integrative Orthologyendoplasmic reticulumAT1G78720
GO:0005794 IEAPLAZA Integrative OrthologyGolgi apparatusAT1G29310
GO:0005739 IEAPLAZA Integrative OrthologymitochondrionAT1G29310

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
Show redundant parents:  
 
InterPro Description
IPR002208SecY/SEC61-alpha family
IPR019561Translocon Sec61/SecY, plug domain
IPR030659SecY conserved site
IPR023201SecY subunit domain

Mapman id Description
23.3.1.3.1.Protein translocation.endoplasmic reticulum.co-translational insertion system.Sec61 subcomplex.subunit alpha
No SignalP domains detected for this gene.