Gene: Potri.001G307300 (Populus trichocarpa)

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Gene Identifier
Potri.001G307300
Transcript Identifier
Potri.001G307300.1
Gene Type
Coding gene
Location
Chr01 : 31016498-31021812 : positive

Family

Gene family
HOM04M000050
(1385 genes in 23 species)
specific family
Duplication type
Block duplicate

Descriptions

No default description found ...
Description of best ortholog(s):

Identifiers

Type Value
aliasPOPTR_0001s31480
idPotri.001G307300.v3.1
pacid37277199
tidPotri.001G307300.1.v3.1
tidPotri.001G307300.1

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0010114 IEAPLAZA Integrative Orthologyresponse to red lightAT5G17880
GO:0050832 IEAPLAZA Integrative Orthologydefense response to fungusAT1G63880
GO:0034644 IEAPLAZA Integrative Orthologycellular response to UVAT1G56510
GO:0002229 IEAPLAZA Integrative Orthologydefense response to oomycetesAT1G56510
GO:0009733 IEAPLAZA Integrative Orthologyresponse to auxinAT4G16890
GO:0009817 IEAPLAZA Integrative Orthologydefense response to fungus, incompatible interactionAT4G16990
GO:0009416 IEAPLAZA Integrative Orthologyresponse to light stimulusAT5G17880
GO:0006952 IEAPLAZA Integrative Orthologydefense responseAT1G63730
GO:0042742 IEAPLAZA Integrative Orthologydefense response to bacteriumAT4G16890
GO:0009862 IEAPLAZA Integrative Orthologysystemic acquired resistance, salicylic acid mediated signaling pathwayAT4G16890
GO:0009861 IEAPLAZA Integrative Orthologyjasmonic acid and ethylene-dependent systemic resistanceAT4G16990
GO:0007165 IEAPLAZA Homology (enrichment)signal transduction
GO:2000071 IEAPLAZA Integrative Orthologyregulation of defense response by callose depositionAT4G16990

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0043531 IEAInterProADP binding
GO:0005515 IEAPLAZA Integrative Orthologyprotein bindingAT4G16890
GO:0000166 IEAPLAZA Integrative Orthologynucleotide bindingAT4G16950

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005829 IEAPLAZA Integrative OrthologycytosolAT4G16890
GO:0043231 IEAPLAZA Integrative Orthologyintracellular membrane-bounded organelleAT4G16890
GO:0005737 IEAPLAZA Integrative OrthologycytoplasmAT4G16890
GO:0005634 IEAPLAZA Integrative OrthologynucleusAT4G16890
GO:0005886 IEAPLAZA Integrative Orthologyplasma membraneAT5G40100
GO:0009941 IEAPLAZA Integrative Orthologychloroplast envelopeAT5G40100

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR032675Leucine-rich repeat domain, L domain-like
IPR002182NB-ARC
IPR027417P-loop containing nucleoside triphosphate hydrolase
IPR011991Winged helix-turn-helix DNA-binding domain

Mapman id Description
35.1not assigned.annotated
No SignalP domains detected for this gene.