Gene: Potri.001G251000 (Populus trichocarpa)

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Gene Identifier
Potri.001G251000
Transcript Identifier
Potri.001G251000.1
Gene Type
Coding gene
Location
Chr01 : 26053780-26058542 : positive

Family

Gene family
HOM04M006433
(32 genes in 26 species)
specific family

Descriptions

No default description found ...
Description of best ortholog(s):

Identifiers

Type Value
aliasestExt_fgenesh4_pm.C_LG_I0627
aliasPOPTR_0001s25810
idPotri.001G251000.v3.1
pacid37274952
tidPotri.001G251000.1.v3.1
tidPotri.001G251000.1

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0006281 IEAInterProDNA repair
GO:0010224 IEAPLAZA Integrative Orthologyresponse to UV-BAT5G58760

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0005515 IEAInterProprotein binding
GO:0003676 IEAInterPronucleic acid binding
GO:0008270 IEAInterProzinc ion binding
GO:0003684 IEAInterProdamaged DNA binding

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005634 IEAInterPronucleus
GO:0080008 IEAInterProCul4-RING E3 ubiquitin ligase complex

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
Show redundant parents:  
 
InterPro Description
IPR015943WD40/YVTN repeat-like-containing domain
IPR001878Zinc finger, CCHC-type
IPR033312DNA damage-binding protein 2
IPR001680WD40 repeat
IPR019775WD40 repeat, conserved site
IPR017986WD40-repeat-containing domain

Mapman id Description
14.6.1.3.2.DNA damage response.nucleotide excision repair (NER).global genome nucleotide excision repair (GG-NER).UV-damaged DNA-binding protein (UV-DDB) heterodimer.component DDB2
No SignalP domains detected for this gene.