Gene: Potri.001G185600 (Populus trichocarpa)

Overview top

Gene Identifier
Potri.001G185600
Transcript Identifier
Potri.001G185600.4
Gene Type
Coding gene
Location
Chr01 : 16266265-16272484 : positive

Family

Gene family
HOM04M004084
(44 genes in 27 species)
specific family

Descriptions

Description
similar to 3-isopropylmalate dehydrogenase 2; similar to chloroplast precursor (EC 1.1.1.85) (Beta-IPM dehydrogenase 2) (IMDH 2) (3-IPM-DH 2).; [ ortholog of At1g80560,]

Identifiers

Type Value
aliasPOPTR_0001s18630
aliasgw1.I.272.1
idPotri.001G185600.v3.1
pacid37275370
tidPotri.001G185600.4.v3.1
tidPotri.001G185600.4

Toolbox

Explore

Create

View

Browse

 

Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0009098 IEAInterProleucine biosynthetic process
GO:0055114 IEAInterProoxidation-reduction process
GO:0009651 IEAPLAZA Integrative Orthologyresponse to salt stressAT5G14200
GO:0019761 IEAPLAZA Integrative Orthologyglucosinolate biosynthetic processAT5G14200

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0003862 IEAInterPro3-isopropylmalate dehydrogenase activity
GO:0016616 IEAInterProoxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor
GO:0000287 IEAInterPromagnesium ion binding
GO:0051287 IEAInterProNAD binding

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005737 IEAInterProcytoplasm
GO:0009570 IEAPLAZA Integrative Orthologychloroplast stromaAT5G14200
GO:0009507 IEAPLAZA Integrative OrthologychloroplastAT5G14200
GO:0009941 IEAPLAZA Integrative Orthologychloroplast envelopeAT1G80560
GO:0009536 IEAPLAZA Integrative OrthologyplastidAT1G31180
GO:0009579 IEAPLAZA Integrative OrthologythylakoidAT1G31180

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
Show redundant parents:  
 
InterPro Description
IPR004429Isopropylmalate dehydrogenase
IPR024084Isopropylmalate dehydrogenase-like domain
IPR019818Isocitrate/isopropylmalate dehydrogenase, conserved site

Mapman id Description
4.1.3.2.5.3.Amino acid metabolism.biosynthesis.pyruvate family.pyruvate-derived amino acids.leucine.3-isopropylmalate dehydrogenase
9.5.1.4.Secondary metabolism.glucosinolates.glucosinolate biosynthesis.methylthioalkylmalate dehydrogenase
No SignalP domains detected for this gene.