Gene: Potri.001G185500 (Populus trichocarpa)

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Gene Identifier
Potri.001G185500
Transcript Identifier
Potri.001G185500.1
Gene Type
Coding gene
Location
Chr01 : 16249569-16262261 : positive

Family

Gene family
HOM04M000193
(477 genes in 29 species)
specific family
Subfamily
ORTHO04M004593
(45 genes in 28 species)
specific family

Descriptions

No default description found ...
Description of best ortholog(s):

Identifiers

Type Value
idPotri.001G185500.v3.1
pacid37278445
tidPotri.001G185500.1.v3.1
tidPotri.001G185500.1

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0008152 IEAInterPrometabolic process
GO:0090410 IEAPLAZA Integrative Orthologymalonate catabolic processAT3G16170
GO:0006633 IEAPLAZA Integrative Orthologyfatty acid biosynthetic processAT3G16170

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0003824 IEAInterProcatalytic activity
GO:0090409 IEAPLAZA Integrative Orthologymalonyl-CoA synthetase activityAT3G16170

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005634 IEAPLAZA Integrative OrthologynucleusAT3G16170
GO:0005739 IEAPLAZA Integrative OrthologymitochondrionAT3G16170
GO:0016020 IEAPLAZA Integrative OrthologymembraneAT3G16170
GO:0005829 IEAPLAZA Integrative OrthologycytosolAT3G16170

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR000873AMP-dependent synthetase/ligase
IPR025110AMP-binding enzyme, C-terminal domain
IPR020845AMP-binding, conserved site

Mapman id Description
5.1.5.3.Lipid metabolism.fatty acid biosynthesis.mitochondrial fatty acid synthase (mtFAS) system.malonyl-CoA synthetase (mtMCS)
No SignalP domains detected for this gene.