Gene: Potri.001G049400 (Populus trichocarpa)

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Gene Identifier
Potri.001G049400
Transcript Identifier
Potri.001G049400.3
Gene Type
Coding gene
Location
Chr01 : 3742718-3750984 : negative

Family

Gene family
HOM04M000714
(182 genes in 28 species)
specific family
Duplication type
Block duplicate

Descriptions

Description
WD-40 repeat family protein; similar to contains 7 WD-40 repeats ; similar to LEUNIG (GP:11141605)(Arabidopsis thaliana); WD-40 repeat family protein; similar to contains 7 WD-40 repeats ; similar to LEUNIG (GP:11141605)(Arabidopsis thaliana); WD-40 repea

Identifiers

Type Value
aliasPOPTR_0001s14580
aliasPOPTR_0001s14560
aliasfgenesh4_pg.C_LG_I000428
idPotri.001G049400.v3.1
pacid37279638
tidPotri.001G049400.3.v3.1
tidPotri.001G049400.3

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:2000024 IEAPLAZA Integrative Orthologyregulation of leaf developmentAT2G32700
GO:0009617 IEAPLAZA Integrative Orthologyresponse to bacteriumAT2G32700
GO:0047484 IEAPLAZA Integrative Orthologyregulation of response to osmotic stressAT2G32700
GO:0009624 IEAPLAZA Integrative Orthologyresponse to nematodeAT2G32700
GO:0009944 IEAPLAZA Integrative Orthologypolarity specification of adaxial/abaxial axisAT2G32700
GO:0006974 IEAPLAZA Integrative Orthologycellular response to DNA damage stimulusAT2G32700
GO:0009620 IEAPLAZA Integrative Orthologyresponse to fungusAT2G32700
GO:0006355 IEAPLAZA Integrative Orthologyregulation of transcription, DNA-templatedAT2G32700
GO:0045995 IEAPLAZA Integrative Orthologyregulation of embryonic developmentAT2G32700
GO:0080001 IEAPLAZA Integrative Orthologymucilage extrusion from seed coatAT2G32700
GO:0010073 IEAPLAZA Integrative Orthologymeristem maintenanceAT2G32700
GO:0010192 IEAPLAZA Integrative Orthologymucilage biosynthetic processAT2G32700
GO:1902183 IEAPLAZA Integrative Orthologyregulation of shoot apical meristem developmentAT2G32700
GO:0010393 IEAPLAZA Integrative Orthologygalacturonan metabolic processAT2G32700
GO:0010272 IEAPLAZA Integrative Orthologyresponse to silver ionAT2G32700
GO:0071217 IEAPLAZA Integrative Orthologycellular response to external biotic stimulusAT2G32700
GO:0045893 IEAPLAZA Integrative Orthologypositive regulation of transcription, DNA-templatedAT2G32700
GO:0009908 IEAPLAZA Integrative Orthologyflower developmentAT2G32700
GO:0045892 IEAPLAZA Integrative Orthologynegative regulation of transcription, DNA-templatedAT2G32700
GO:0009909 IEAPLAZA Integrative Orthologyregulation of flower developmentAT2G32700
GO:0001666 IEAPLAZA Integrative Orthologyresponse to hypoxiaAT2G32700
GO:0006979 IEAPLAZA Integrative Orthologyresponse to oxidative stressAT2G32700
GO:0009827 IEAPLAZA Integrative Orthologyplant-type cell wall modificationAT2G32700
GO:0009733 IEAPLAZA Integrative Orthologyresponse to auxinAT2G32700
GO:0009414 IEAPLAZA Integrative Orthologyresponse to water deprivationAT2G32700
GO:0048358 IEAPLAZA Integrative Orthologymucilage pectin biosynthetic processAT2G32700
GO:0048359 IEAPLAZA Integrative Orthologymucilage metabolic process involved in seed coat developmentAT2G32700
GO:0046898 IEAPLAZA Integrative Orthologyresponse to cycloheximideAT2G32700
GO:0009611 IEAPLAZA Integrative Orthologyresponse to woundingAT2G32700
GO:1901001 IEAPLAZA Integrative Orthologynegative regulation of response to salt stressAT2G32700
GO:0009793 IEAPLAZA Integrative Orthologyembryo development ending in seed dormancyAT2G32700
GO:1902074 IEAPLAZA Integrative Orthologyresponse to saltAT2G32700

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0005515 IEAInterProprotein binding
GO:0003713 IEAPLAZA Integrative Orthologytranscription coactivator activityAT2G32700

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005634 IEAPLAZA Integrative OrthologynucleusAT2G32700

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
Show redundant parents:  
 
InterPro Description
IPR015943WD40/YVTN repeat-like-containing domain
IPR001680WD40 repeat
IPR006594LIS1 homology motif
IPR020472G-protein beta WD-40 repeat
IPR019775WD40 repeat, conserved site
IPR017986WD40-repeat-containing domain

Mapman id Description
15.5.53.2.RNA biosynthesis.transcriptional regulation.transcriptional repression.transcriptional co-repressor (LUG)
No SignalP domains detected for this gene.