Gene: PH01001876G0330 (Phyllostachys edulis)

Overview top

Gene Identifier
PH01001876G0330
Transcript Identifier
PH01001876G0330.mRNA
Gene Type
Coding gene
Location
PH01001876 : 237666-241558 : negative

Family

Gene family
HOM04M000415
(276 genes in 29 species)
specific family
Subfamily
ORTHO04M000659
(163 genes in 29 species)
specific family

Descriptions

Description
vesicle-associated membrane protein, putative, expressed

Identifiers

Type Value
tidPH01001876G0330.mRNA

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0016192 IEAInterProvesicle-mediated transport
GO:0006810 IEAInterProtransport
GO:0016973 IEAPLAZA Integrative Orthologypoly(A)+ mRNA export from nucleusAT2G33120
GO:0072661 IEAPLAZA Integrative Orthologyprotein targeting to plasma membraneAT2G33120
GO:0006888 IEAPLAZA Integrative OrthologyER to Golgi vesicle-mediated transportAT2G33120
GO:0009409 IEAPLAZA Integrative Orthologyresponse to coldAT2G33120
GO:0009920 IEAPLAZA Integrative Orthologycell plate formation involved in plant-type cell wall biogenesisAT2G33120
GO:0009733 IEAPLAZA Integrative Orthologyresponse to auxinAT2G33120

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0005515 IEAPLAZA Integrative Orthologyprotein bindingAT1G04750

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0016021 IEAInterProintegral component of membrane
GO:0019898 IEAPLAZA Integrative Orthologyextrinsic component of membraneAT2G33120
GO:0005829 IEAPLAZA Integrative OrthologycytosolAT2G33120
GO:0009506 IEAPLAZA Integrative OrthologyplasmodesmaAT2G33120
GO:0005768 IEAPLAZA Integrative OrthologyendosomeAT2G33120
GO:0009507 IEAPLAZA Integrative OrthologychloroplastAT1G04760
GO:0031965 IEAPLAZA Integrative Orthologynuclear membraneAT2G33120
GO:0005623 IEAPLAZA Integrative OrthologycellAT2G33120
GO:0005635 IEAPLAZA Integrative Orthologynuclear envelopeAT2G33120
GO:0005622 IEAPLAZA Integrative OrthologyintracellularAT2G33120
GO:0005886 IEAPLAZA Integrative Orthologyplasma membraneAT2G33120
GO:0009504 IEAPLAZA Integrative Orthologycell plateAT2G33120
GO:0005774 IEAPLAZA Integrative Orthologyvacuolar membraneAT2G33120
GO:0005783 IEAPLAZA Integrative Orthologyendoplasmic reticulumAT2G33110

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR010908Longin domain
IPR001388Synaptobrevin
IPR011012Longin-like domain

Mapman id Description
13.4.2.3.4.Cell cycle organisation.cytokinesis.cell-plate formation.SNARE cell-plate vesicle fusion complex.R-SNARE component VAMP721/VAMP722
22.7.5.1.Vesicle trafficking.SNARE target membrane recognition and fusion complexes.R-type SNARE longin components.VAMP7-group component
No SignalP domains detected for this gene.