Gene: PH01000797G0460 (Phyllostachys edulis)

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Gene Identifier
PH01000797G0460
Transcript Identifier
PH01000797G0460.mRNA
Gene Type
Coding gene
Location
PH01000797 : 277850-280805 : positive

Family

Gene family
HOM04M001032
(135 genes in 29 species)
specific family

Descriptions

Description
PHD-finger domain containing protein, putative, expressed

Identifiers

Type Value
tidPH01000797G0460.mRNA

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0071367 IEAPLAZA Integrative Orthologycellular response to brassinosteroid stimulusAT5G22260
GO:0048235 IEAPLAZA Integrative Orthologypollen sperm cell differentiationAT1G66170
GO:0010208 IEAPLAZA Integrative Orthologypollen wall assemblyAT5G22260
GO:0009846 IEAPLAZA Integrative Orthologypollen germinationAT5G22260
GO:0046686 IEAPLAZA Integrative Orthologyresponse to cadmium ionAT5G22260
GO:0022414 IEAPLAZA Integrative Orthologyreproductive processAT5G22260
GO:0006355 IEAPLAZA Integrative Orthologyregulation of transcription, DNA-templatedAT1G66170
GO:0010032 IEAPLAZA Integrative Orthologymeiotic chromosome condensationAT1G66170
GO:0007060 IEAPLAZA Integrative Orthologymale meiosis chromosome segregationAT1G66170
GO:0055046 IEAPLAZA Integrative OrthologymicrogametogenesisAT5G22260
GO:0045893 IEAPLAZA Integrative Orthologypositive regulation of transcription, DNA-templatedAT5G22260
GO:0051321 IEAPLAZA Integrative Orthologymeiotic cell cycleAT1G66170
GO:0000212 IEAPLAZA Integrative Orthologymeiotic spindle organizationAT1G66170
GO:0048655 IEAPLAZA Integrative Orthologyanther wall tapetum morphogenesisAT5G22260
GO:0009651 IEAPLAZA Integrative Orthologyresponse to salt stressAT5G22260
GO:0010043 IEAPLAZA Integrative Orthologyresponse to zinc ionAT5G22260

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0042393 IEAPLAZA Integrative Orthologyhistone bindingAT1G66170
GO:0008705 IEAPLAZA Integrative Orthologymethionine synthase activityAT5G22260
GO:0003677 IEAPLAZA Integrative OrthologyDNA bindingAT1G66170
GO:0008270 IEAPLAZA Integrative Orthologyzinc ion bindingAT5G22260
GO:0033613 IEAPLAZA Integrative Orthologyactivating transcription factor bindingAT1G66170
GO:0005507 IEAPLAZA Integrative Orthologycopper ion bindingAT5G22260
GO:1990188 IEAPLAZA Integrative Orthologyeuchromatin bindingAT1G66170
GO:0000975 IEAPLAZA Integrative Orthologyregulatory region DNA bindingAT1G66170
GO:0043565 IEAPLAZA Integrative Orthologysequence-specific DNA bindingAT1G66170

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005719 IEAPLAZA Integrative Orthologynuclear euchromatinAT1G66170
GO:0016020 IEAPLAZA Integrative OrthologymembraneAT5G22260
GO:0005777 IEAPLAZA Integrative OrthologyperoxisomeAT5G22260
GO:0005634 IEAPLAZA Integrative OrthologynucleusAT1G66170
GO:0005886 IEAPLAZA Integrative Orthologyplasma membraneAT5G22260
GO:0005829 IEAPLAZA Integrative OrthologycytosolAT5G22260
GO:0048046 IEAPLAZA Integrative OrthologyapoplastAT5G22260
GO:0009506 IEAPLAZA Integrative OrthologyplasmodesmaAT5G22260
GO:0009507 IEAPLAZA Integrative OrthologychloroplastAT5G22260
GO:0005774 IEAPLAZA Integrative Orthologyvacuolar membraneAT5G22260
GO:0009570 IEAPLAZA Integrative Orthologychloroplast stromaAT5G22260

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Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR013083Zinc finger, RING/FYVE/PHD-type
IPR019787Zinc finger, PHD-finger
IPR019786Zinc finger, PHD-type, conserved site
IPR001965Zinc finger, PHD-type
IPR011011Zinc finger, FYVE/PHD-type

Mapman id Description
13.3.6.1.3.Cell cycle organisation.mitosis and meiosis.meiotic recombination.meiotic initiation.regulatory protein (MMD1/DUET)
15.5.30.RNA biosynthesis.transcriptional regulation.transcription factor (PHD)
No SignalP domains detected for this gene.