Gene: PH01000673G0630 (Phyllostachys edulis)

Overview top

Gene Identifier
PH01000673G0630
Transcript Identifier
PH01000673G0630.mRNA
Gene Type
Coding gene
Location
PH01000673 : 482247-489261 : positive

Family

Gene family
HOM04M001962
(79 genes in 29 species)
specific family
Duplication type
Block duplicate

Descriptions

Description
SET domain containing protein, expressed

Identifiers

Type Value
tidPH01000673G0630.mRNA

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0010228 IEAPLAZA Integrative Orthologyvegetative to reproductive phase transition of meristemAT2G23380
GO:0016571 IEAPLAZA Integrative Orthologyhistone methylationAT2G23380
GO:2000014 IEAPLAZA Integrative Orthologyregulation of endosperm developmentAT1G02580
GO:0045892 IEAPLAZA Integrative Orthologynegative regulation of transcription, DNA-templatedAT1G02580
GO:0006349 IEAPLAZA Integrative Orthologyregulation of gene expression by genetic imprintingAT1G02580
GO:0009965 IEAPLAZA Integrative Orthologyleaf morphogenesisAT2G23380
GO:0009646 IEAPLAZA Integrative Orthologyresponse to absence of lightAT1G02580
GO:0045857 IEAPLAZA Integrative Orthologynegative regulation of molecular function, epigeneticAT2G23380
GO:0009960 IEAPLAZA Integrative Orthologyendosperm developmentAT4G02020
GO:0048317 IEAPLAZA Integrative Orthologyseed morphogenesisAT1G02580
GO:0009294 IEAPLAZA Integrative OrthologyDNA mediated transformationAT2G23380

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0005515 IEAInterProprotein binding
GO:0018024 IEAPLAZA Integrative Orthologyhistone-lysine N-methyltransferase activityAT2G23380
GO:0003727 IEAPLAZA Integrative Orthologysingle-stranded RNA bindingAT4G02020
GO:0043565 IEAPLAZA Integrative Orthologysequence-specific DNA bindingAT1G02580

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0031519 IEAInterProPcG protein complex
GO:0009506 IEAPLAZA Integrative OrthologyplasmodesmaAT4G02020
GO:0005634 IEAPLAZA Integrative OrthologynucleusAT1G02580
GO:0005677 IEAPLAZA Integrative Orthologychromatin silencing complexAT4G02020

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR001214SET domain
IPR026489CXC domain
IPR025778Histone-lysine N-methyltransferase, EZ
IPR001005SANT/Myb domain
IPR033467Tesmin/TSO1-like CXC domain

Mapman id Description
12.3.3.1.1.4.Chromatin organisation.histone modifications.histone lysine methylation.PRC2 histone methylation complex.VRN/FIS/EMF core subcomplexes.catalytic component CLF|SWN|MEA
12.3.3.3.Chromatin organisation.histone modifications.histone lysine methylation.class-I histone methyltransferase (Ez)
No SignalP domains detected for this gene.