Gene: PH01000556G0480 (Phyllostachys edulis)

Overview top

Gene Identifier
PH01000556G0480
Transcript Identifier
PH01000556G0480.mRNA
Gene Type
Coding gene
Location
PH01000556 : 280210-283618 : negative

Family

Gene family
HOM04M000221
(431 genes in 29 species)
specific family
Subfamily
ORTHO04M000195
(339 genes in 28 species)
specific family
Duplication type
Block duplicate

Descriptions

Description
histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH1, putative, expressed

Identifiers

Type Value
tidPH01000556G0480.mRNA

Toolbox

Explore

Create

View

Browse

 

Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0034968 IEAInterProhistone lysine methylation
GO:0016571 IEAInterProhistone methylation
GO:0040029 IEAPLAZA Integrative Orthologyregulation of gene expression, epigeneticAT5G04940
GO:0048366 IEAPLAZA Integrative Orthologyleaf developmentAT2G24740
GO:0008361 IEAPLAZA Integrative Orthologyregulation of cell sizeAT2G24740

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0042393 IEAInterProhistone binding
GO:0008270 IEAInterProzinc ion binding
GO:0018024 IEAInterProhistone-lysine N-methyltransferase activity
GO:0005515 IEAInterProprotein binding

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005634 IEAInterPronucleus
GO:0005694 IEAPLAZA Integrative OrthologychromosomeAT1G73100

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
Show redundant parents:  
 
InterPro Description
IPR003105SRA-YDG
IPR007728Pre-SET domain
IPR001214SET domain
IPR025794Histone H3-K9 methyltransferase, plant
IPR015947PUA-like domain

Mapman id Description
12.3.3.7.Chromatin organisation.histone modifications.histone lysine methylation.class-V histone methyltransferase (Suvar)
12.5.1.16.1.Chromatin organisation.DNA methylation.RNA-directed DNA methylation (RdDM) pathway.downstream SUVH-DNAJ methylation reader complex.methylated DNA binding component SUVH1/3
No SignalP domains detected for this gene.