Gene: PH01000127G0790 (Phyllostachys edulis)

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Gene Identifier
PH01000127G0790
Transcript Identifier
PH01000127G0790.mRNA
Gene Type
Coding gene
Location
PH01000127 : 612894-615932 : positive

Family

Gene family
HOM04M000117
(742 genes in 29 species)
specific family
Subfamily
ORTHO04M003221
(58 genes in 29 species)
specific family

Descriptions

Description
pre-mRNA-splicing factor ATP-dependent RNA helicase, putative, expressed

Identifiers

Type Value
tidPH01000127G0790.mRNA

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0016070 IEAPLAZA Tree-based OrthologyRNA metabolic processSolyc07g039550.2

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0004386 IEAInterProhelicase activity
GO:0003729 IEAPLAZA Integrative OrthologymRNA bindingAT3G26560
GO:0003724 IEAPLAZA Tree-based OrthologyRNA helicase activitySolyc07g039550.2
GO:0003676 IEAPLAZA Homology (enrichment)nucleic acid binding

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005829 IEAPLAZA Integrative OrthologycytosolAT3G26560
GO:0005739 IEAPLAZA Integrative OrthologymitochondrionAT3G26560
GO:0009506 IEAPLAZA Integrative OrthologyplasmodesmaAT3G26560

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
Show redundant parents:  
 
InterPro Description
IPR001650Helicase, C-terminal
IPR007502Helicase-associated domain
IPR011709Domain of unknown function DUF1605
IPR002464DNA/RNA helicase, ATP-dependent, DEAH-box type, conserved site
IPR014001Helicase superfamily 1/2, ATP-binding domain
IPR027417P-loop containing nucleoside triphosphate hydrolase

Mapman id Description
35.1not assigned.annotated
No SignalP domains detected for this gene.