Gene: PH01000018G2540 (Phyllostachys edulis)

Overview top

Gene Identifier
PH01000018G2540
Transcript Identifier
PH01000018G2540.mRNA
Gene Type
Coding gene
Location
PH01000018 : 1668000-1670328 : positive

Family

Gene family
HOM04M000336
(323 genes in 27 species)
specific family
Subfamily
ORTHO04M001489
(94 genes in 23 species)
specific family

Descriptions

Description
ATROPGEF7/ROPGEF7, putative, expressed

Identifiers

Type Value
tidPH01000018G2540.mRNA

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0080092 IEAPLAZA Integrative Orthologyregulation of pollen tube growthAT4G13240
GO:0048364 IEAPLAZA Integrative Orthologyroot developmentAT1G52240
GO:0009664 IEAPLAZA Tree-based Orthologyplant-type cell wall organizationAT2G45890
GO:0080147 IEAPLAZA Integrative Orthologyroot hair cell developmentAT1G52240
GO:0048767 IEAPLAZA Tree-based Orthologyroot hair elongationAT2G45890
GO:0009860 IEAPLAZA Integrative Orthologypollen tube growthAT1G79860
GO:0009793 IEAPLAZA Integrative Orthologyembryo development ending in seed dormancyAT1G79860

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0005089 IEAInterProRho guanyl-nucleotide exchange factor activity
GO:0005515 IEAPLAZA Integrative Orthologyprotein bindingAT3G24620
GO:0005085 IEAPLAZA Integrative Orthologyguanyl-nucleotide exchange factor activityAT3G24620
GO:0042802 IEAPLAZA Integrative Orthologyidentical protein bindingAT3G24620

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0090406 IEAPLAZA Integrative Orthologypollen tubeAT1G79860
GO:0016324 IEAPLAZA Tree-based Orthologyapical plasma membraneAT4G38430
GO:0005829 IEAPLAZA Tree-based OrthologycytosolAT5G02010
GO:0005737 IEAPLAZA Integrative OrthologycytoplasmAT1G52240
GO:0005634 IEAPLAZA Integrative OrthologynucleusAT1G52240
GO:0005886 IEAPLAZA Integrative Orthologyplasma membraneAT1G79860
GO:0009531 IEAPLAZA Tree-based Orthologysecondary cell wallAT2G45890

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
Show redundant parents:  
 
InterPro Description
IPR005512PRONE domain

Mapman id Description
27.4.3.1.Multi-process regulation.Rop-GTPase regulatory system.RopGEF guanine nucleotide exchange factor activities.exchange factor (PRONE)
No SignalP domains detected for this gene.