Gene: OsR498G0816159200.01 (Oryza sativa ssp. indica)

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Gene Identifier
OsR498G0816159200.01
Transcript Identifier
OsR498G0816159200.01.T01
Gene Type
Coding gene
Location
Chr8 : 22524450-22529693 : negative

Family

Gene family
HOM04M001483
(100 genes in 27 species)
specific family
Subfamily
ORTHO04M002232
(75 genes in 27 species)
specific family

Descriptions

Description
protein_coding

Identifiers

Type Value
tidOsR498G0816159200.01.T01

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0006417 IEAPLAZA Integrative Orthologyregulation of translationAT5G53180
GO:0000381 IEAPLAZA Integrative Orthologyregulation of alternative mRNA splicing, via spliceosomeAT5G53180
GO:0043484 IEAPLAZA Integrative Orthologyregulation of RNA splicingAT5G53180
GO:0009846 IEAPLAZA Integrative Orthologypollen germinationAT5G53180
GO:0009845 IEAPLAZA Integrative Orthologyseed germinationAT5G53180

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0003676 IEAInterPronucleic acid binding
GO:0003723 IEAPLAZA Integrative OrthologyRNA bindingAT5G53180
GO:0003729 IEAPLAZA Integrative OrthologymRNA bindingAT5G53180

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005634 IEAPLAZA Integrative OrthologynucleusAT5G53180
GO:0005737 IEAPLAZA Integrative OrthologycytoplasmAT5G53180
GO:0000932 IEAPLAZA Integrative OrthologyP-bodyAT5G53180

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR034792PTBPH1/PTBPH2, RNA recognition motif 1
IPR034793PTBPH1/PTBPH2, RNA recognition motif 2
IPR034794PTBPH1/PTBPH2, RNA recognition motif 3
IPR000504RNA recognition motif domain

Mapman id Description
16.4.6.7.RNA processing.pre-mRNA splicing.spliceosome-associated non-snRNP factor activities.splicing factor (PTB)
No SignalP domains detected for this gene.