Gene: OsR498G0509739800.01 (Oryza sativa ssp. indica)

Overview top

Gene Identifier
OsR498G0509739800.01
Transcript Identifier
OsR498G0509739800.01.T01
Gene Type
Coding gene
Location
Chr5 : 2954972-2961014 : negative

Family

Gene family
HOM04M000392
(290 genes in 29 species)
specific family
Subfamily
ORTHO04M001263
(104 genes in 29 species)
specific family

Descriptions

Description
protein_coding

Identifiers

Type Value
tidOsR498G0509739800.01.T01

Toolbox

Explore

Create

View

Browse

 

Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0006511 IEAInterProubiquitin-dependent protein catabolic process
GO:0010265 IEAPLAZA Integrative OrthologySCF complex assemblyAT4G02570
GO:0048366 IEAPLAZA Integrative Orthologyleaf developmentAT4G02570
GO:0009733 IEAPLAZA Integrative Orthologyresponse to auxinAT4G02570
GO:0009867 IEAPLAZA Integrative Orthologyjasmonic acid mediated signaling pathwayAT4G02570
GO:0042752 IEAPLAZA Integrative Orthologyregulation of circadian rhythmAT4G02570
GO:0009753 IEAPLAZA Integrative Orthologyresponse to jasmonic acidAT4G02570
GO:0009793 IEAPLAZA Integrative Orthologyembryo development ending in seed dormancyAT4G02570
GO:0010087 IEAPLAZA Integrative Orthologyphloem or xylem histogenesisAT4G02570

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0031625 IEAInterProubiquitin protein ligase binding
GO:0005515 IEAPLAZA Integrative Orthologyprotein bindingAT4G02570

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0031461 IEAInterProcullin-RING ubiquitin ligase complex
GO:0005829 IEAPLAZA Integrative OrthologycytosolAT4G02570
GO:0005819 IEAPLAZA Integrative OrthologyspindleAT4G02570
GO:0005737 IEAPLAZA Integrative OrthologycytoplasmAT4G02570
GO:0000151 IEAPLAZA Integrative Orthologyubiquitin ligase complexAT4G02570
GO:0005634 IEAPLAZA Integrative OrthologynucleusAT4G02570
GO:0000794 IEAPLAZA Integrative Orthologycondensed nuclear chromosomeAT4G02570
GO:0009524 IEAPLAZA Integrative OrthologyphragmoplastAT4G02570
GO:0009941 IEAPLAZA Integrative Orthologychloroplast envelopeAT1G02980

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
Show redundant parents:  
 
InterPro Description
IPR011991Winged helix-turn-helix DNA-binding domain
IPR019559Cullin protein, neddylation domain
IPR001373Cullin, N-terminal
IPR016157Cullin, conserved site
IPR016158Cullin homology
IPR016159Cullin repeat-like-containing domain

Mapman id Description
19.2.2.8.1.2.Protein homeostasis.ubiquitin-proteasome system.ubiquitin-fold protein conjugation.Cullin-based ubiquitylation complexes.SKP1-CUL1-FBX (SCF) E3 ligase complexes.scaffold component CUL1/CUL2
No SignalP domains detected for this gene.