Gene: OsR498G0307058500.01 (Oryza sativa ssp. indica)

Overview top

Gene Identifier
OsR498G0307058500.01
Transcript Identifier
OsR498G0307058500.01.T02
Gene Type
Coding gene
Location
Chr3 : 34121418-34125127 : positive

Family

Gene family
HOM04M001378
(107 genes in 29 species)
specific family
Subfamily
ORTHO04M007932
(32 genes in 23 species)
specific family

Descriptions

Description
protein_coding

Identifiers

Type Value
tidOsR498G0307058500.01.T02

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0000737 IEAInterProDNA catabolic process, endonucleolytic
GO:0006259 IEAInterProDNA metabolic process
GO:0034090 IEAPLAZA Integrative Orthologymaintenance of meiotic sister chromatid cohesionAT3G13170
GO:0042138 IEAPLAZA Integrative Orthologymeiotic DNA double-strand break formationAT3G13170
GO:0007129 IEAPLAZA Integrative OrthologysynapsisAT3G13170
GO:0000706 IEAPLAZA Integrative Orthologymeiotic DNA double-strand break processingAT3G13170
GO:0007131 IEAPLAZA Integrative Orthologyreciprocal meiotic recombinationAT3G13170
GO:0051026 IEAPLAZA Integrative Orthologychiasma assemblyAT3G13170

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0003677 IEAInterProDNA binding
GO:0003824 IEAInterProcatalytic activity
GO:0005524 IEAInterProATP binding
GO:0005515 IEAPLAZA Integrative Orthologyprotein bindingAT3G13170

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005694 IEAInterProchromosome
GO:0005634 IEAPLAZA Integrative OrthologynucleusAT3G13170

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR034136Topoisomerase 6 subunit A/Spo11, TOPRIM domain
IPR011991Winged helix-turn-helix DNA-binding domain
IPR002815Spo11/DNA topoisomerase VI subunit A
IPR013049Spo11/DNA topoisomerase VI, subunit A, N-terminal
IPR013048Meiotic recombination, Spo11

Mapman id Description
13.3.6.2.1.1.Cell cycle organisation.mitosis and meiosis.meiotic recombination.meiotic double strand break initiation.meiotic topoisomerase-VI complex.component a/SPO11
No SignalP domains detected for this gene.