Gene: OsR498G0202977300.01 (Oryza sativa ssp. indica)

Overview top

Gene Identifier
OsR498G0202977300.01
Transcript Identifier
OsR498G0202977300.01.T01
Gene Type
Coding gene
Location
Chr2 : 2678907-2683991 : positive

Family

Gene family
HOM04M000592
(210 genes in 29 species)
specific family
Subfamily
ORTHO04M002110
(78 genes in 29 species)
specific family
Duplication type
Tandem duplicate   and   Block duplicate

Descriptions

Description
protein_coding

Identifiers

Type Value
tidOsR498G0202977300.01.T01

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0010267 IEAPLAZA Integrative Orthologyproduction of ta-siRNAs involved in RNA interferenceAT2G27100
GO:2000011 IEAPLAZA Integrative Orthologyregulation of adaxial/abaxial pattern formationAT2G27100
GO:0000381 IEAPLAZA Integrative Orthologyregulation of alternative mRNA splicing, via spliceosomeAT2G27100
GO:0048367 IEAPLAZA Integrative Orthologyshoot system developmentAT2G27100
GO:0006355 IEAPLAZA Integrative Orthologyregulation of transcription, DNA-templatedAT2G27100
GO:0031053 IEAPLAZA Integrative Orthologyprimary miRNA processingAT2G27100
GO:0048509 IEAPLAZA Integrative Orthologyregulation of meristem developmentAT2G27100
GO:0008380 IEAPLAZA Integrative OrthologyRNA splicingAT2G27100

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0003676 IEAInterPronucleic acid binding
GO:0005515 IEAPLAZA Integrative Orthologyprotein bindingAT2G27100
GO:0003700 IEAPLAZA Homology (enrichment)transcription factor activity, sequence-specific DNA binding
GO:0043565 IEAPLAZA Homology (enrichment)sequence-specific DNA binding
GO:0008270 IEAPLAZA Homology (enrichment)zinc ion binding

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005829 IEAPLAZA Integrative OrthologycytosolAT2G27100
GO:0010445 IEAPLAZA Integrative Orthologynuclear dicing bodyAT2G27100
GO:0005846 IEAPLAZA Integrative Orthologynuclear cap binding complexAT2G27100
GO:0009507 IEAPLAZA Integrative OrthologychloroplastAT2G27100
GO:0005634 IEAPLAZA Integrative OrthologynucleusAT2G27100
GO:0005730 IEAPLAZA Integrative OrthologynucleolusAT2G27100
GO:0016607 IEAPLAZA Integrative Orthologynuclear speckAT2G27100

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
Show redundant parents:  
 
InterPro Description
IPR007042Arsenite-resistance protein 2
IPR021933Protein of unknown function DUF3546
IPR013087Zinc finger C2H2-type

Mapman id Description
15.5.15.RNA biosynthesis.transcriptional regulation.transcription factor (C2H2-ZF)
16.10.2.1.3.RNA processing.mRNA silencing.miRNA pathway.DCL1-HYL1 miRNA biogenesis complex.component SERRATE
No SignalP domains detected for this gene.