Gene: Oropetium_20150105_28060 (Oropetium thomaeum)

Overview top

Gene Identifier
Oropetium_20150105_28060
Transcript Identifier
Oropetium_20150105_28060A
Gene Type
Coding gene
Location
Oropetium_genomic_20141112_342 : 249-1934 : positive

Family

Gene family
HOM04M000901
(151 genes in 29 species)
specific family
Subfamily
ORTHO04M001406
(98 genes in 29 species)
specific family

Descriptions

Description
Similar to Spermidine synthase (Coffea arabica)

Identifiers

Type Value
idOropetium_20150105_28060.v1.0
pacid35992583
tidOropetium_20150105_28060A.v1.0
tidOropetium_20150105_28060A

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0042742 IEAPLAZA Integrative Orthologydefense response to bacteriumAT5G53120
GO:0006597 IEAPLAZA Integrative Orthologyspermine biosynthetic processAT5G53120
GO:0006596 IEAPLAZA Integrative Orthologypolyamine biosynthetic processAT5G53120
GO:0008295 IEAPLAZA Integrative Orthologyspermidine biosynthetic processAT1G23820

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0003824 IEAInterProcatalytic activity
GO:0005515 IEAPLAZA Integrative Orthologyprotein bindingAT5G53120
GO:0016768 IEAPLAZA Integrative Orthologyspermine synthase activityAT5G53120
GO:0004766 IEAPLAZA Integrative Orthologyspermidine synthase activityAT5G53120

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005886 IEAPLAZA Integrative Orthologyplasma membraneAT1G70310
GO:0005829 IEAPLAZA Integrative OrthologycytosolAT1G23820
GO:0005737 IEAPLAZA Integrative OrthologycytoplasmAT5G53120

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR001045Spermidine/spermine synthases
IPR030373Polyamine biosynthesis domain, conserved site
IPR030374Polyamine biosynthesis domain
IPR029063S-adenosyl-L-methionine-dependent methyltransferase

Mapman id Description
8.2.3.Polyamine metabolism.spermidine biosynthesis.spermine synthase
No SignalP domains detected for this gene.