Gene: Oropetium_20150105_28008 (Oropetium thomaeum)

Overview top

Gene Identifier
Oropetium_20150105_28008
Transcript Identifier
Oropetium_20150105_28008A
Gene Type
Coding gene
Location
Oropetium_genomic_20141112_327 : 28348-29670 : negative

Family

Gene family
HOM04M001267
(114 genes in 29 species)
specific family
Subfamily
ORTHO04M001173
(109 genes in 29 species)
specific family
Duplication type
Tandem duplicate

Descriptions

No default description found ...
Description of best ortholog(s):

Identifiers

Type Value
idOropetium_20150105_28008.v1.0
pacid36004708
tidOropetium_20150105_28008A.v1.0
tidOropetium_20150105_28008A

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0010027 IEAPLAZA Integrative Orthologythylakoid membrane organizationAT2G01880
GO:0009639 IEAPLAZA Integrative Orthologyresponse to red or far red lightAT1G14700
GO:0042542 IEAPLAZA Integrative Orthologyresponse to hydrogen peroxideAT3G17790
GO:0009740 IEAPLAZA Integrative Orthologygibberellic acid mediated signaling pathwayAT1G14700
GO:0006355 IEAPLAZA Integrative Orthologyregulation of transcription, DNA-templatedAT1G14700
GO:0030643 IEAPLAZA Integrative Orthologycellular phosphate ion homeostasisAT3G17790
GO:0010236 IEAPLAZA Integrative Orthologyplastoquinone biosynthetic processAT2G01880
GO:0010017 IEAPLAZA Integrative Orthologyred or far-red light signaling pathwayAT1G14700
GO:0009704 IEAPLAZA Integrative Orthologyde-etiolationAT1G14700
GO:0031539 IEAPLAZA Integrative Orthologypositive regulation of anthocyanin metabolic processAT1G14700
GO:0009416 IEAPLAZA Integrative Orthologyresponse to light stimulusAT2G01880
GO:0009658 IEAPLAZA Integrative Orthologychloroplast organizationAT2G01880
GO:0042793 IEAPLAZA Integrative Orthologytranscription from plastid promoterAT2G01880

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0016787 IEAInterProhydrolase activity
GO:0003993 IEAInterProacid phosphatase activity
GO:0003677 IEAPLAZA Integrative OrthologyDNA bindingAT1G14700
GO:0042802 IEAPLAZA Integrative Orthologyidentical protein bindingAT1G14700
GO:0016791 IEAPLAZA Integrative Orthologyphosphatase activityAT3G17790

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0010287 IEAPLAZA Integrative OrthologyplastoglobuleAT1G14700
GO:0005634 IEAPLAZA Integrative OrthologynucleusAT1G14700
GO:0009941 IEAPLAZA Integrative Orthologychloroplast envelopeAT2G01890
GO:0000427 IEAPLAZA Integrative Orthologyplastid-encoded plastid RNA polymerase complexAT2G01880
GO:0005829 IEAPLAZA Integrative OrthologycytosolAT1G14700
GO:0009507 IEAPLAZA Integrative OrthologychloroplastAT2G01880
GO:0009508 IEAPLAZA Integrative Orthologyplastid chromosomeAT2G01880
GO:0009579 IEAPLAZA Integrative OrthologythylakoidAT1G14700
GO:0009535 IEAPLAZA Integrative Orthologychloroplast thylakoid membraneAT1G14700
GO:0009536 IEAPLAZA Integrative OrthologyplastidAT1G14700
GO:0005773 IEAPLAZA Integrative OrthologyvacuoleAT1G14700
GO:0009534 IEAPLAZA Integrative Orthologychloroplast thylakoidAT2G01880
GO:0009570 IEAPLAZA Integrative Orthologychloroplast stromaAT2G01880
GO:0009295 IEAPLAZA Integrative OrthologynucleoidAT2G01880

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR029052Metallo-dependent phosphatase-like
IPR004843Calcineurin-like phosphoesterase domain, ApaH type
IPR024927Acid phosphatase, type 5

Mapman id Description
35.1not assigned.annotated
No SignalP domains detected for this gene.