Gene: Oropetium_20150105_27001 (Oropetium thomaeum)

Overview top

Gene Identifier
Oropetium_20150105_27001
Transcript Identifier
Oropetium_20150105_27001A
Gene Type
Coding gene
Location
Oropetium_genomic_20141112_222 : 28745-29700 : positive

Family

Gene family
HOM04M000108
(781 genes in 27 species)
specific family
Subfamily
ORTHO04M000131
(431 genes in 27 species)
specific family
Duplication type
Block duplicate

Descriptions

No default description found ...
Description of best ortholog(s):

Identifiers

Type Value
idOropetium_20150105_27001.v1.0
pacid36016836
tidOropetium_20150105_27001A.v1.0
tidOropetium_20150105_27001A

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0006355 IEAInterProregulation of transcription, DNA-templated
GO:0009733 IEAPLAZA Integrative Orthologyresponse to auxinAT5G66700
GO:0019760 IEAPLAZA Integrative Orthologyglucosinolate metabolic processAT2G18550
GO:0048364 IEAPLAZA Integrative Orthologyroot developmentAT5G66700

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0003677 IEAInterProDNA binding
GO:0043565 IEAInterProsequence-specific DNA binding
GO:0003700 IEAPLAZA Homology (enrichment)transcription factor activity, sequence-specific DNA binding

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
Show redundant parents:  
 
InterPro Description
IPR001356Homeobox domain
IPR000047Helix-turn-helix motif
IPR017970Homeobox, conserved site
IPR009057Homeobox domain-like

Mapman id Description
15.5.3.1.RNA biosynthesis.transcriptional regulation.Homeobox transcription factor superfamily.transcription factor (HD-ZIP I/II)
No SignalP domains detected for this gene.