Gene: Oropetium_20150105_26831 (Oropetium thomaeum)

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Gene Identifier
Oropetium_20150105_26831
Transcript Identifier
Oropetium_20150105_26831A
Gene Type
Coding gene
Location
Oropetium_genomic_20141112_220 : 14182-20139 : negative

Family

Gene family
HOM04M003562
(48 genes in 29 species)
specific family
Duplication type
Block duplicate

Descriptions

No default description found ...
Description of best ortholog(s):

Identifiers

Type Value
idOropetium_20150105_26831.v1.0
pacid35993668
tidOropetium_20150105_26831A.v1.0
tidOropetium_20150105_26831A

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0000398 IEAInterPromRNA splicing, via spliceosome
GO:0045694 IEAPLAZA Integrative Orthologyregulation of embryo sac egg cell differentiationAT5G06160

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0003723 IEAInterProRNA binding
GO:0003676 IEAInterPronucleic acid binding
GO:0008270 IEAInterProzinc ion binding

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005681 IEAInterProspliceosomal complex
GO:0005634 IEAInterPronucleus
GO:0005829 IEAPLAZA Integrative OrthologycytosolAT5G06160

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Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
Show redundant parents:  
 
InterPro Description
IPR031776Splicing factor 3A subunit 3
IPR021966Splicing factor SF3a60 binding domain
IPR024598Domain of unknown function DUF3449
IPR000690Matrin/U1-C, C2H2-type zinc finger
IPR013087Zinc finger C2H2-type

Mapman id Description
16.4.1.2.3.3.RNA processing.pre-mRNA splicing.U2-type-intron-specific major spliceosome.U2 small nuclear ribonucleoprotein particle (snRNP).splicing factor 3A complex.component SF3A3
No SignalP domains detected for this gene.