PLAZA 4.0 Monocots gene overview : Oropetium_20150105_26367

Gene: Oropetium_20150105_26367 (Oropetium thomaeum)

Overview

Gene Identifier: Oropetium_20150105_26367
Transcript Identifier: Oropetium_20150105_26367A
Gene Type: Coding gene
Location: Oropetium_genomic_20141112_134 : 100280-100594 : positive

Family

Gene family: HOM04M001801
(84 genes in 21 species)
specific family
Duplication type: Block duplicate

Descriptions

No default description found ...
Description of best ortholog(s):

Identifiers

Type	Value
id	Oropetium_20150105_26367.v1.0
pacid	35992702
tid	Oropetium_20150105_26367A.v1.0
tid	Oropetium_20150105_26367A

Toolbox

Explore

...the colinearity of this gene with other genomes.
...the local gene organization for homologous genes.
...the phylogenetic tree of the homologous gene family.
...the orthologs using the Integrative Orthology Viewer.
...the conserved binding sites (upstream/downstream,intron)

Create

...a custom phylogenetic tree using this gene as seed.

View

Browse

...the gene in IGV.js, a genome browser

Biological Process

GO term	Evidence(s)	Provider	Description	Source
GO:0010375	IEA	PLAZA Integrative Orthology	stomatal complex patterning	AT1G80180

Cellular Component

GO term	Evidence(s)	Provider	Description	Source
GO:0005886	IEA	PLAZA Integrative Orthology	plasma membrane	AT1G80180

Color Legend

Experimental Evidence

Electronic Evidence

Computational Reviewed Evidence

InterPro	Description
IPR031421	Protein of unknown function DUF4666

Mapman id	Description
35.2	not assigned.not annotated

No SignalP domains detected for this gene.