Gene: Oropetium_20150105_25972 (Oropetium thomaeum)

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Gene Identifier
Oropetium_20150105_25972
Transcript Identifier
Oropetium_20150105_25972A
Gene Type
Coding gene
Location
Oropetium_genomic_20141112_042 : 1309257-1314106 : negative

Family

Gene family
HOM04M000721
(181 genes in 29 species)
specific family
Subfamily
ORTHO04M000710
(155 genes in 29 species)
specific family

Descriptions

No default description found ...
Description of best ortholog(s):

Identifiers

Type Value
idOropetium_20150105_25972.v1.0
pacid36018367
tidOropetium_20150105_25972A.v1.0
tidOropetium_20150105_25972A

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0016575 IEAInterProhistone deacetylation
GO:0009845 IEAPLAZA Integrative Orthologyseed germinationAT5G35600
GO:0010431 IEAPLAZA Integrative Orthologyseed maturationAT5G63110
GO:0009553 IEAPLAZA Integrative Orthologyembryo sac developmentAT5G35600
GO:0010228 IEAPLAZA Integrative Orthologyvegetative to reproductive phase transition of meristemAT5G63110
GO:0016441 IEAPLAZA Integrative Orthologyposttranscriptional gene silencingAT5G63110
GO:0009793 IEAPLAZA Integrative Orthologyembryo development ending in seed dormancyAT5G63110
GO:0009651 IEAPLAZA Integrative Orthologyresponse to salt stressAT5G63110
GO:0009737 IEAPLAZA Integrative Orthologyresponse to abscisic acidAT5G63110
GO:0016458 IEAPLAZA Integrative Orthologygene silencingAT5G63110

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0004407 IEAInterProhistone deacetylase activity
GO:0005515 IEAPLAZA Integrative Orthologyprotein bindingAT5G63110

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0009941 IEAPLAZA Integrative Orthologychloroplast envelopeAT5G63110
GO:0005634 IEAPLAZA Integrative OrthologynucleusAT5G63110

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR023801Histone deacetylase domain
IPR000286Histone deacetylase superfamily
IPR003084Histone deacetylase

Mapman id Description
12.3.2.1.1.Chromatin organisation.histone modifications.histone deacetylation.HD1 histone deacetylase family.class-I histone deacetylase
No SignalP domains detected for this gene.