Gene: Oropetium_20150105_25334 (Oropetium thomaeum)

Overview top

Gene Identifier
Oropetium_20150105_25334
Transcript Identifier
Oropetium_20150105_25334A
Gene Type
Coding gene
Location
Oropetium_genomic_20141112_105 : 53832-59167 : negative

Family

Gene family
HOM04M001588
(94 genes in 29 species)
specific family
Subfamily
ORTHO04M006238
(37 genes in 28 species)
specific family

Descriptions

No default description found ...
Description of best ortholog(s):

Identifiers

Type Value
idOropetium_20150105_25334.v1.0
pacid35995923
tidOropetium_20150105_25334A.v1.0
tidOropetium_20150105_25334A

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0006434 IEAInterProseryl-tRNA aminoacylation
GO:0006418 IEAInterProtRNA aminoacylation for protein translation
GO:0006355 IEAInterProregulation of transcription, DNA-templated
GO:0007005 IEAPLAZA Integrative Orthologymitochondrion organizationAT1G11870
GO:0009658 IEAPLAZA Integrative Orthologychloroplast organizationAT1G11870
GO:0048481 IEAPLAZA Integrative Orthologyplant ovule developmentAT1G11870
GO:0043039 IEAPLAZA Integrative OrthologytRNA aminoacylationAT1G11870

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0000166 IEAInterPronucleotide binding
GO:0004828 IEAInterProserine-tRNA ligase activity
GO:0005524 IEAInterProATP binding
GO:0004812 IEAInterProaminoacyl-tRNA ligase activity

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005737 IEAInterProcytoplasm
GO:0005739 IEAPLAZA Integrative OrthologymitochondrionAT1G11870
GO:0009507 IEAPLAZA Integrative OrthologychloroplastAT1G11870

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR033729Serine-tRNA ligase catalytic core domain
IPR002317Serine-tRNA ligase, type1
IPR002314Aminoacyl-tRNA synthetase, class II (G/ P/ S/T)
IPR007592GLABROUS1 enhancer-binding protein family
IPR015866Serine-tRNA synthetase, type1, N-terminal
IPR006195Aminoacyl-tRNA synthetase, class II
IPR010978tRNA-binding arm

Mapman id Description
17.2.18.Protein biosynthesis.aminoacyl-tRNA synthetase activities.serine-tRNA ligase
No SignalP domains detected for this gene.