Gene: Oropetium_20150105_24386 (Oropetium thomaeum)

Overview top

Gene Identifier
Oropetium_20150105_24386
Transcript Identifier
Oropetium_20150105_24386A
Gene Type
Coding gene
Location
Oropetium_genomic_20141112_009 : 4122873-4123544 : positive

Family

Gene family
HOM04M000577
(214 genes in 27 species)
specific family
Subfamily
ORTHO04M000568
(176 genes in 27 species)
specific family
Duplication type
Tandem duplicate

Descriptions

No default description found ...
Description of best ortholog(s):

Identifiers

Type Value
idOropetium_20150105_24386.v1.0
pacid36020158
tidOropetium_20150105_24386A.v1.0
tidOropetium_20150105_24386A

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0010215 IEAInterProcellulose microfibril organization
GO:0016049 IEAInterProcell growth
GO:0050832 IEAPLAZA Tree-based Orthologydefense response to fungusAT5G60950
GO:0010214 IEAPLAZA Tree-based Orthologyseed coat developmentAT3G29810
GO:0048354 IEAPLAZA Tree-based Orthologymucilage biosynthetic process involved in seed coat developmentAT3G29810
GO:0009825 IEAPLAZA Tree-based Orthologymultidimensional cell growthAT5G60920
GO:0052324 IEAPLAZA Tree-based Orthologyplant-type cell wall cellulose biosynthetic processAT3G29810
GO:0009832 IEAPLAZA Tree-based Orthologyplant-type cell wall biogenesisAT3G29810
GO:0009834 IEAPLAZA Integrative Orthologyplant-type secondary cell wall biogenesisAT5G15630
GO:0009664 IEAPLAZA Tree-based Orthologyplant-type cell wall organizationAT3G29810
GO:0048316 IEAPLAZA Tree-based Orthologyseed developmentAT3G29810
GO:0009651 IEAPLAZA Tree-based Orthologyresponse to salt stressAT5G60920

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0031225 IEAInterProanchored component of membrane
GO:0046658 IEAPLAZA Tree-based Orthologyanchored component of plasma membraneAT3G29810
GO:0005886 IEAPLAZA Integrative Orthologyplasma membraneAT5G15630
GO:0009505 IEAPLAZA Tree-based Orthologyplant-type cell wallAT5G60920
GO:0005774 IEAPLAZA Integrative Orthologyvacuolar membraneAT5G15630
GO:0005794 IEAPLAZA Tree-based OrthologyGolgi apparatusAT3G29810
GO:0009930 IEAPLAZA Tree-based Orthologylongitudinal side of cell surfaceAT5G60920

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
Show redundant parents:  
 
InterPro Description
IPR006918COBRA, plant

Mapman id Description
21.1.2.2.Cell wall organisation.cellulose.cellulose-hemicellulose network assembly.regulatory protein (COB)
No SignalP domains detected for this gene.