Gene: Oropetium_20150105_24121 (Oropetium thomaeum)

Overview top

Gene Identifier
Oropetium_20150105_24121
Transcript Identifier
Oropetium_20150105_24121A
Gene Type
Coding gene
Location
Oropetium_genomic_20141112_088 : 198611-203054 : positive

Family

Gene family
HOM04M001860
(82 genes in 29 species)
specific family
Subfamily
ORTHO04M003024
(60 genes in 29 species)
specific family

Descriptions

Description
Similar to EMB3004: Bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase, chloroplastic (Arabidopsis thaliana)

Identifiers

Type Value
idOropetium_20150105_24121.v1.0
pacid36017562
tidOropetium_20150105_24121A.v1.0
tidOropetium_20150105_24121A

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0055114 IEAInterProoxidation-reduction process
GO:0019632 IEAInterProshikimate metabolic process
GO:0009793 IEAPLAZA Integrative Orthologyembryo development ending in seed dormancyAT3G06350

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0003855 IEAInterPro3-dehydroquinate dehydratase activity
GO:0003824 IEAInterProcatalytic activity
GO:0004764 IEAInterProshikimate 3-dehydrogenase (NADP+) activity
GO:0050661 IEAInterProNADP binding

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0009507 IEAPLAZA Integrative OrthologychloroplastAT3G06350
GO:0009570 IEAPLAZA Integrative Orthologychloroplast stromaAT3G06350

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR0013813-dehydroquinate dehydratase type I
IPR013785Aldolase-type TIM barrel
IPR022893Shikimate dehydrogenase family
IPR013708Shikimate dehydrogenase substrate binding, N-terminal
IPR006151Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase
IPR016040NAD(P)-binding domain
IPR011342Shikimate dehydrogenase

Mapman id Description
4.1.5.1.3.Amino acid metabolism.biosynthesis.shikimate family.shikimate pathway.3-dehydroquinate dehydratase and shikimate dehydrogenase
No SignalP domains detected for this gene.