Gene: Oropetium_20150105_16799 (Oropetium thomaeum)

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Gene Identifier
Oropetium_20150105_16799
Transcript Identifier
Oropetium_20150105_16799A
Gene Type
Coding gene
Location
Oropetium_genomic_20141112_036 : 1962010-1964480 : positive

Family

Gene family
HOM04M000051
(1378 genes in 27 species)
specific family
Subfamily
ORTHO04M000205
(327 genes in 27 species)
specific family

Descriptions

No default description found ...
Description of best ortholog(s):

Identifiers

Type Value
idOropetium_20150105_16799.v1.0
pacid36004278
tidOropetium_20150105_16799A.v1.0
tidOropetium_20150105_16799A

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0042545 IEAInterProcell wall modification
GO:0009860 IEAPLAZA Integrative Orthologypollen tube growthAT5G47500
GO:0045490 IEAPLAZA Integrative Orthologypectin catabolic processAT5G55590

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0030599 IEAInterPropectinesterase activity

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005618 IEAInterProcell wall
GO:0090406 IEAPLAZA Integrative Orthologypollen tubeAT5G47500
GO:0000139 IEAPLAZA Integrative OrthologyGolgi membraneAT5G47500

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
Show redundant parents:  
 
InterPro Description
IPR012334Pectin lyase fold
IPR000070Pectinesterase, catalytic
IPR033131Pectinesterase, Asp active site
IPR011050Pectin lyase fold/virulence factor

Mapman id Description
21.3.1.2.1.Cell wall organisation.pectin.homogalacturonan.modification and degradation.pectin methylesterase
No SignalP domains detected for this gene.