Gene: Oropetium_20150105_14209 (Oropetium thomaeum)

Overview top

Gene Identifier
Oropetium_20150105_14209
Transcript Identifier
Oropetium_20150105_14209A
Gene Type
Coding gene
Location
Oropetium_genomic_20141112_017 : 1889131-1892724 : negative

Family

Gene family
HOM04M001025
(135 genes in 29 species)
specific family
Subfamily
ORTHO04M007677
(33 genes in 28 species)
specific family
Duplication type
Tandem duplicate

Descriptions

No default description found ...
Description of best ortholog(s):

Identifiers

Type Value
idOropetium_20150105_14209.v1.0
pacid36005124
tidOropetium_20150105_14209A.v1.0
tidOropetium_20150105_14209A

Toolbox

Explore

Create

View

Browse

 

Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0000154 IEAInterProrRNA modification
GO:0006364 IEAInterProrRNA processing
GO:0009409 IEAPLAZA Integrative Orthologyresponse to coldAT1G01860

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0000179 IEAInterProrRNA (adenine-N6,N6-)-dimethyltransferase activity
GO:0008649 IEAInterProrRNA methyltransferase activity
GO:0003676 IEAPLAZA Homology (enrichment)nucleic acid binding

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
Show redundant parents:  
 
InterPro Description
IPR023165rRNA adenine dimethylase-like
IPR001737Ribosomal RNA adenine methyltransferase KsgA/Erm
IPR020596Ribosomal RNA adenine methylase transferase, conserved site
IPR020598Ribosomal RNA adenine methylase transferase, N-terminal
IPR029063S-adenosyl-L-methionine-dependent methyltransferase
IPR011530Ribosomal RNA adenine dimethylase

Mapman id Description
17.1.1.2.1.3.Protein biosynthesis.ribosome biogenesis.rRNA biosynthesis.post-transcriptional rRNA modification.methylation.rRNA adenosine dimethylase (PFC)
No SignalP domains detected for this gene.