Gene: Oropetium_20150105_11619 (Oropetium thomaeum)

Overview top

Gene Identifier
Oropetium_20150105_11619
Transcript Identifier
Oropetium_20150105_11619A
Gene Type
Coding gene
Location
Oropetium_genomic_20141112_026 : 915742-917057 : negative

Family

Gene family
HOM04M000122
(709 genes in 27 species)
specific family
Subfamily
ORTHO04M000070
(641 genes in 27 species)
specific family
Duplication type
Block duplicate

Descriptions

No default description found ...
Description of best ortholog(s):

Identifiers

Type Value
idOropetium_20150105_11619.v1.0
pacid36015135
tidOropetium_20150105_11619A.v1.0
tidOropetium_20150105_11619A

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0006355 IEAInterProregulation of transcription, DNA-templated
GO:0010200 IEAPLAZA Tree-based Orthologyresponse to chitinAT1G04100
GO:0010205 IEAPLAZA Tree-based OrthologyphotoinhibitionAT3G16500
GO:0010600 IEAPLAZA Tree-based Orthologyregulation of auxin biosynthetic processSolyc09g090910.1
GO:0009737 IEAPLAZA Tree-based Orthologyresponse to abscisic acidAT3G16500
GO:0045040 IEAPLAZA Integrative Orthologyprotein import into mitochondrial outer membraneAT4G29080
GO:0006109 IEAPLAZA Integrative Orthologyregulation of carbohydrate metabolic processAT4G29080
GO:0006626 IEAPLAZA Integrative Orthologyprotein targeting to mitochondrionAT4G29080
GO:0060777 IEAPLAZA Tree-based Orthologycompound leaf morphogenesisSolyc04g076850.2
GO:0009745 IEAPLAZA Tree-based Orthologysucrose mediated signalingAT3G16500
GO:0006950 IEAPLAZA Tree-based Orthologyresponse to stressSolyc04g076850.2
GO:0009867 IEAPLAZA Tree-based Orthologyjasmonic acid mediated signaling pathwayAT3G16500
GO:0080167 IEAPLAZA Integrative Orthologyresponse to karrikinAT4G29080
GO:0010051 IEAPLAZA Tree-based Orthologyxylem and phloem pattern formationAT1G04550
GO:1901332 IEAPLAZA Integrative Orthologynegative regulation of lateral root developmentAT2G22670
GO:0080086 IEAPLAZA Integrative Orthologystamen filament developmentAT3G15540
GO:0010252 IEAPLAZA Tree-based Orthologyauxin homeostasisSolyc12g096980.1
GO:0010311 IEAPLAZA Integrative Orthologylateral root formationAT2G22670
GO:0010114 IEAPLAZA Tree-based Orthologyresponse to red lightAT4G32280
GO:0016036 IEAPLAZA Tree-based Orthologycellular response to phosphate starvationAT3G16500
GO:0009408 IEAPLAZA Tree-based Orthologyresponse to heatSolyc12g096980.1
GO:0009409 IEAPLAZA Tree-based Orthologyresponse to coldAT3G16500
GO:0009414 IEAPLAZA Tree-based Orthologyresponse to water deprivationSolyc03g121060.2
GO:0009733 IEAPLAZA Integrative Orthologyresponse to auxinAT4G14560
GO:0009734 IEAPLAZA Integrative Orthologyauxin-activated signaling pathwayAT5G65670
GO:0009611 IEAPLAZA Tree-based Orthologyresponse to woundingAT3G23050
GO:0009651 IEAPLAZA Tree-based Orthologyresponse to salt stressAT3G16500
GO:0010102 IEAPLAZA Tree-based Orthologylateral root morphogenesisAT4G14550
GO:0010224 IEAPLAZA Tree-based Orthologyresponse to UV-BAT3G16500
GO:0031540 IEAPLAZA Tree-based Orthologyregulation of anthocyanin biosynthetic processAT3G16500
GO:0010588 IEAPLAZA Tree-based Orthologycotyledon vascular tissue pattern formationAT2G46990
GO:0031542 IEAPLAZA Tree-based Orthologypositive regulation of anthocyanin biosynthetic processAT3G16500
GO:0019430 IEAPLAZA Tree-based Orthologyremoval of superoxide radicalsAT3G16500
GO:0009718 IEAPLAZA Tree-based Orthologyanthocyanin-containing compound biosynthetic processAT3G16500
GO:0009723 IEAPLAZA Tree-based Orthologyresponse to ethyleneAT3G16500
GO:0009647 IEAPLAZA Tree-based OrthologyskotomorphogenesisAT2G46990
GO:0009880 IEAPLAZA Tree-based Orthologyembryonic pattern specificationAT1G04550
GO:0010154 IEAPLAZA Tree-based Orthologyfruit developmentSolyc04g076850.2
GO:0050832 IEAPLAZA Tree-based Orthologydefense response to fungusAT3G16500
GO:0010930 IEAPLAZA Tree-based Orthologynegative regulation of auxin mediated signaling pathwaySolyc04g076850.2
GO:0010218 IEAPLAZA Tree-based Orthologyresponse to far red lightAT4G32280
GO:0048367 IEAPLAZA Tree-based Orthologyshoot system developmentAT3G17600
GO:0045892 IEAPLAZA Integrative Orthologynegative regulation of transcription, DNA-templatedAT2G22670
GO:0009704 IEAPLAZA Integrative Orthologyde-etiolationAT1G52830
GO:0009628 IEAPLAZA Tree-based Orthologyresponse to abiotic stimulusSolyc03g121060.2
GO:0048364 IEAPLAZA Tree-based Orthologyroot developmentAT3G62100
GO:0009630 IEAPLAZA Tree-based OrthologygravitropismAT3G62100
GO:0009555 IEAPLAZA Tree-based Orthologypollen developmentAT2G01200
GO:1900057 IEAPLAZA Tree-based Orthologypositive regulation of leaf senescenceAT1G04250
GO:0009753 IEAPLAZA Tree-based Orthologyresponse to jasmonic acidAT3G16500
GO:0009791 IEAPLAZA Tree-based Orthologypost-embryonic developmentSolyc09g065850.2
GO:0009793 IEAPLAZA Tree-based Orthologyembryo development ending in seed dormancyAT2G01200
GO:1902074 IEAPLAZA Tree-based Orthologyresponse to saltSolyc03g121060.2
GO:0010262 IEAPLAZA Tree-based Orthologysomatic embryogenesisAT3G62100

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0005515 IEAInterProprotein binding
GO:0042802 IEAPLAZA Integrative Orthologyidentical protein bindingAT4G14560
GO:0003700 IEAPLAZA Tree-based Orthologytranscription factor activity, sequence-specific DNA bindingSolyc04g076850.2
GO:0003993 IEAPLAZA Integrative Orthologyacid phosphatase activityAT4G29080
GO:0043565 IEAPLAZA Integrative Orthologysequence-specific DNA bindingAT4G14560
GO:0044212 IEAPLAZA Integrative Orthologytranscription regulatory region DNA bindingAT4G14560
GO:0008195 IEAPLAZA Integrative Orthologyphosphatidate phosphatase activityAT4G29080
GO:0030943 IEAPLAZA Integrative Orthologymitochondrion targeting sequence bindingAT4G29080

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005634 IEAInterPronucleus
GO:0010287 IEAPLAZA Integrative OrthologyplastoglobuleAT4G29080
GO:0005739 IEAPLAZA Integrative OrthologymitochondrionAT4G29080
GO:0005737 IEAPLAZA Integrative OrthologycytoplasmAT2G22670
GO:0005740 IEAPLAZA Integrative Orthologymitochondrial envelopeAT4G29080
GO:0009505 IEAPLAZA Tree-based Orthologyplant-type cell wallAT3G16500
GO:0009941 IEAPLAZA Integrative Orthologychloroplast envelopeAT4G29080
GO:0010319 IEAPLAZA Tree-based OrthologystromuleAT3G16500
GO:0005768 IEAPLAZA Integrative OrthologyendosomeAT4G29080
GO:0031977 IEAPLAZA Integrative Orthologythylakoid lumenAT4G29080
GO:0005802 IEAPLAZA Integrative Orthologytrans-Golgi networkAT4G29080
GO:0005887 IEAPLAZA Tree-based Orthologyintegral component of plasma membraneAT3G16500
GO:0009579 IEAPLAZA Integrative OrthologythylakoidAT4G29080
GO:0009535 IEAPLAZA Integrative Orthologychloroplast thylakoid membraneAT4G29080
GO:0009534 IEAPLAZA Integrative Orthologychloroplast thylakoidAT4G29080
GO:0009570 IEAPLAZA Tree-based Orthologychloroplast stromaAT3G16500
GO:0005886 IEAPLAZA Integrative Orthologyplasma membraneAT4G29080
GO:0005829 IEAPLAZA Tree-based OrthologycytosolAT3G16500
GO:0009506 IEAPLAZA Tree-based OrthologyplasmodesmaAT4G28640
GO:0009507 IEAPLAZA Integrative OrthologychloroplastAT4G29080
GO:0005794 IEAPLAZA Integrative OrthologyGolgi apparatusAT4G29080

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Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR003311AUX/IAA protein
IPR033389AUX/IAA domain
IPR000270PB1 domain

Mapman id Description
35.1not assigned.annotated
No SignalP domains detected for this gene.