Gene: Oropetium_20150105_07918 (Oropetium thomaeum)

Overview top

Gene Identifier
Oropetium_20150105_07918
Transcript Identifier
Oropetium_20150105_07918A
Gene Type
Coding gene
Location
Oropetium_genomic_20141112_018 : 2970555-2976079 : positive

Family

Gene family
HOM04M003160
(53 genes in 28 species)
specific family

Descriptions

Description
Similar to Squalene synthase (Nicotiana benthamiana)

Identifiers

Type Value
idOropetium_20150105_07918.v1.0
pacid36018690
tidOropetium_20150105_07918A.v1.0
tidOropetium_20150105_07918A

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0006696 IEAInterProergosterol biosynthetic process
GO:0009058 IEAInterProbiosynthetic process
GO:0008610 IEAPLAZA Homology (enrichment)lipid biosynthetic process
GO:0016126 IEAPLAZA Integrative Orthologysterol biosynthetic processAT4G34640

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0004310 IEAInterProfarnesyl-diphosphate farnesyltransferase activity
GO:0051996 IEAInterProsqualene synthase activity
GO:0016740 IEAInterProtransferase activity
GO:0016765 IEAInterProtransferase activity, transferring alkyl or aryl (other than methyl) groups

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005789 IEAPLAZA Integrative Orthologyendoplasmic reticulum membraneAT4G34640
GO:0016021 IEAPLAZA Homology (enrichment)integral component of membrane
GO:0005783 IEAPLAZA Integrative Orthologyendoplasmic reticulumAT4G34640
GO:0005886 IEAPLAZA Integrative Orthologyplasma membraneAT4G34640

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR033904Trans-Isoprenyl Diphosphate Synthases, head-to-head
IPR008949Isoprenoid synthase domain
IPR002060Squalene/phytoene synthase
IPR019845Squalene/phytoene synthase, conserved site

Mapman id Description
9.1.5.1.Secondary metabolism.terpenoids.cycloartenol biosynthesis.squalene synthase
No SignalP domains detected for this gene.