Gene: Oropetium_20150105_04582 (Oropetium thomaeum)

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Gene Identifier
Oropetium_20150105_04582
Transcript Identifier
Oropetium_20150105_04582A
Gene Type
Coding gene
Location
Oropetium_genomic_20141112_012 : 2933787-2939930 : negative

Family

Gene family
HOM04M000341
(321 genes in 29 species)
specific family
Subfamily
ORTHO04M001355
(100 genes in 29 species)
specific family

Descriptions

No default description found ...
Description of best ortholog(s):

Identifiers

Type Value
idOropetium_20150105_04582.v1.0
pacid36012530
tidOropetium_20150105_04582A.v1.0
tidOropetium_20150105_04582A

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0009793 IEAPLAZA Integrative Orthologyembryo development ending in seed dormancyAT2G34880
GO:0006355 IEAPLAZA Integrative Orthologyregulation of transcription, DNA-templatedAT2G38950
GO:0009555 IEAPLAZA Integrative Orthologypollen developmentAT2G34880
GO:0048579 IEAPLAZA Integrative Orthologynegative regulation of long-day photoperiodism, floweringAT4G20400
GO:0009910 IEAPLAZA Integrative Orthologynegative regulation of flower developmentAT4G20400
GO:0048573 IEAPLAZA Integrative Orthologyphotoperiodism, floweringAT4G20400
GO:0009909 IEAPLAZA Integrative Orthologyregulation of flower developmentAT2G34880
GO:0045892 IEAPLAZA Integrative Orthologynegative regulation of transcription, DNA-templatedAT4G20400
GO:0034720 IEAPLAZA Integrative Orthologyhistone H3-K4 demethylationAT4G20400
GO:0010216 IEAPLAZA Integrative Orthologymaintenance of DNA methylationAT4G20400

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0000976 IEAPLAZA Integrative Orthologytranscription regulatory region sequence-specific DNA bindingAT4G20400
GO:0043565 IEAPLAZA Integrative Orthologysequence-specific DNA bindingAT1G30810
GO:0005515 IEAPLAZA Integrative Orthologyprotein bindingAT4G20400
GO:0032453 IEAPLAZA Integrative Orthologyhistone demethylase activity (H3-K4 specific)AT4G20400
GO:0034647 IEAPLAZA Integrative Orthologyhistone demethylase activity (H3-trimethyl-K4 specific)AT2G34880

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005634 IEAInterPronucleus

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR003349JmjN domain
IPR004198Zinc finger, C5HC2-type
IPR003888FY-rich, N-terminal
IPR003347JmjC domain
IPR003889FY-rich, C-terminal

Mapman id Description
12.3.3.9.4.Chromatin organisation.histone modifications.histone lysine methylation.JmjC group histone demethylase activities.histone demethylase (PKDM7)
15.5.29.RNA biosynthesis.transcriptional regulation.transcription factor (JUMONJI)
No SignalP domains detected for this gene.