Gene: Oropetium_20150105_01301 (Oropetium thomaeum)

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Gene Identifier
Oropetium_20150105_01301
Transcript Identifier
Oropetium_20150105_01301A
Gene Type
Coding gene
Location
Oropetium_genomic_20141112_001 : 7566172-7573039 : negative

Family

Gene family
HOM04M000566
(217 genes in 28 species)
specific family
Subfamily
ORTHO04M000578
(176 genes in 28 species)
specific family

Descriptions

No default description found ...
Description of best ortholog(s):

Identifiers

Type Value
idOropetium_20150105_01301.v1.0
pacid35998144
tidOropetium_20150105_01301A.v1.0
tidOropetium_20150105_01301A

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0032776 IEAPLAZA Integrative OrthologyDNA methylation on cytosineAT3G07610
GO:0016567 IEAPLAZA Integrative Orthologyprotein ubiquitinationAT1G09060
GO:0033169 IEAPLAZA Integrative Orthologyhistone H3-K9 demethylationAT3G07610
GO:0010468 IEAPLAZA Integrative Orthologyregulation of gene expressionAT3G07610
GO:2000616 IEAPLAZA Integrative Orthologynegative regulation of histone H3-K9 acetylationAT1G09060
GO:0048366 IEAPLAZA Integrative Orthologyleaf developmentAT3G07610
GO:0010628 IEAPLAZA Integrative Orthologypositive regulation of gene expressionAT1G09060
GO:0009908 IEAPLAZA Integrative Orthologyflower developmentAT3G07610
GO:0051573 IEAPLAZA Integrative Orthologynegative regulation of histone H3-K9 methylationAT1G09060
GO:0060969 IEAPLAZA Integrative Orthologynegative regulation of gene silencingAT3G07610
GO:0009555 IEAPLAZA Integrative Orthologypollen developmentAT3G07610
GO:0080188 IEAPLAZA Integrative OrthologyRNA-directed DNA methylationAT3G07610
GO:0070919 IEAPLAZA Integrative Orthologyproduction of siRNA involved in chromatin silencing by small RNAAT3G07610

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0032454 IEAPLAZA Integrative Orthologyhistone demethylase activity (H3-K9 specific)AT3G07610
GO:0042393 IEAPLAZA Integrative Orthologyhistone bindingAT1G09060
GO:0005515 IEAPLAZA Integrative Orthologyprotein bindingAT1G09060
GO:0000976 IEAPLAZA Integrative Orthologytranscription regulatory region sequence-specific DNA bindingAT1G09060
GO:0061630 IEAPLAZA Integrative Orthologyubiquitin protein ligase activityAT1G09060
GO:0031490 IEAPLAZA Integrative Orthologychromatin DNA bindingAT3G07610

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005634 IEAPLAZA Integrative OrthologynucleusAT1G09060

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR003347JmjC domain
IPR014977WRC domain
IPR001841Zinc finger, RING-type

Mapman id Description
12.3.3.9.1.Chromatin organisation.histone modifications.histone lysine methylation.JmjC group histone demethylase activities.histone demethylase (KDM3)
15.5.29.RNA biosynthesis.transcriptional regulation.transcription factor (JUMONJI)
No SignalP domains detected for this gene.