Gene: Oropetium_20150105_01298 (Oropetium thomaeum)

Overview top

Gene Identifier
Oropetium_20150105_01298
Transcript Identifier
Oropetium_20150105_01298A
Gene Type
Coding gene
Location
Oropetium_genomic_20141112_001 : 7537048-7550547 : negative

Family

Gene family
HOM04M004058
(44 genes in 29 species)
specific family

Descriptions

No default description found ...
Description of best ortholog(s):

Identifiers

Type Value
idOropetium_20150105_01298.v1.0
pacid35997464
tidOropetium_20150105_01298A.v1.0
tidOropetium_20150105_01298A

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0045292 IEAInterPromRNA cis splicing, via spliceosome
GO:0051028 IEAInterPromRNA transport
GO:0016070 IEAInterProRNA metabolic process
GO:0048574 IEAPLAZA Integrative Orthologylong-day photoperiodism, floweringAT2G13540
GO:0031053 IEAPLAZA Integrative Orthologyprimary miRNA processingAT2G13540
GO:0000394 IEAPLAZA Integrative OrthologyRNA splicing, via endonucleolytic cleavage and ligationAT2G13540
GO:0009737 IEAPLAZA Integrative Orthologyresponse to abscisic acidAT2G13540

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0000339 IEAInterProRNA cap binding
GO:0003723 IEAInterProRNA binding
GO:0005515 IEAInterProprotein binding
GO:0005488 IEAInterProbinding

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005846 IEAInterPronuclear cap binding complex
GO:0005634 IEAPLAZA Integrative OrthologynucleusAT2G13540

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR027159Nuclear cap-binding protein subunit 1
IPR015172MIF4G-like, type 1
IPR003890MIF4G-like, type 3
IPR015174MIF4G-like, type 2
IPR016024Armadillo-type fold

Mapman id Description
16.1.3.1.RNA processing.RNA 5'-end cap adding.CBP80-CBP20 mRNA Cap-Binding complex (CBC).component CBP80
No SignalP domains detected for this gene.