Gene: Oropetium_20150105_01160 (Oropetium thomaeum)

Overview top

Gene Identifier
Oropetium_20150105_01160
Transcript Identifier
Oropetium_20150105_01160A
Gene Type
Coding gene
Location
Oropetium_genomic_20141112_001 : 6672502-6677589 : negative

Family

Gene family
HOM04M001079
(130 genes in 27 species)
specific family
Subfamily
ORTHO04M001086
(116 genes in 27 species)
specific family
Duplication type
Block duplicate

Descriptions

No default description found ...
Description of best ortholog(s):

Identifiers

Type Value
idOropetium_20150105_01160.v1.0
pacid35998026
tidOropetium_20150105_01160A.v1.0
tidOropetium_20150105_01160A

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0046373 IEAInterProL-arabinose metabolic process
GO:0045493 IEAPLAZA Integrative Orthologyxylan catabolic processAT3G10740

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0046556 IEAInterProalpha-L-arabinofuranosidase activity
GO:0009044 IEAPLAZA Integrative Orthologyxylan 1,4-beta-xylosidase activityAT3G10740

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005773 IEAPLAZA Integrative OrthologyvacuoleAT3G10740
GO:0009505 IEAPLAZA Integrative Orthologyplant-type cell wallAT3G10740
GO:0048046 IEAPLAZA Integrative OrthologyapoplastAT3G10740

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
Show redundant parents:  
 
InterPro Description
IPR008979Galactose-binding domain-like
IPR010720Alpha-L-arabinofuranosidase, C-terminal
IPR017853Glycoside hydrolase superfamily

Mapman id Description
21.3.2.2.3.1.Cell wall organisation.pectin.rhamnogalacturonan I.modification and degradation.alpha-L-arabinofuranosidase activities.bifunctional alpha-L-arabinofuranosidase and beta-D-xylosidase (ASD)
No SignalP domains detected for this gene.