Gene: OB12G25330 (Oryza brachyantha)

Overview top

Gene Identifier
OB12G25330
Transcript Identifier
OB12G25330.1
Gene Type
Coding gene
Location
12 : 14035280-14040768 : negative

Family

Gene family
HOM04M000677
(189 genes in 27 species)
specific family
Subfamily
ORTHO04M000847
(136 genes in 27 species)
specific family
Duplication type
Block duplicate

Descriptions

Description
Uncharacterized protein

Identifiers

Type Value
logic_namegenemodel_v1.4_oge
tidOB12G25330.1

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:1905392 IEAPLAZA Tree-based Orthologyplant organ morphogenesisAT1G52150
GO:0010067 IEAPLAZA Tree-based Orthologyprocambium histogenesisAT4G32880
GO:0010089 IEAPLAZA Tree-based Orthologyxylem developmentAT4G32880
GO:0030154 IEAPLAZA Tree-based Orthologycell differentiationAT5G60690
GO:0009965 IEAPLAZA Tree-based Orthologyleaf morphogenesisAT1G52150
GO:0009943 IEAPLAZA Integrative Orthologyadaxial/abaxial axis specificationAT1G30490
GO:0009944 IEAPLAZA Integrative Orthologypolarity specification of adaxial/abaxial axisAT2G34710
GO:0045597 IEAPLAZA Tree-based Orthologypositive regulation of cell differentiationAT4G32880
GO:0010072 IEAPLAZA Integrative Orthologyprimary shoot apical meristem specificationAT2G34710
GO:0010051 IEAPLAZA Tree-based Orthologyxylem and phloem pattern formationAT5G60690
GO:0010073 IEAPLAZA Tree-based Orthologymeristem maintenanceAT1G52150
GO:0009880 IEAPLAZA Integrative Orthologyembryonic pattern specificationAT1G30490
GO:0010075 IEAPLAZA Tree-based Orthologyregulation of meristem growthAT1G52150
GO:0080060 IEAPLAZA Integrative Orthologyintegument developmentAT2G34710
GO:0010014 IEAPLAZA Integrative Orthologymeristem initiationAT2G34710
GO:0048263 IEAPLAZA Tree-based Orthologydetermination of dorsal identityAT1G52150
GO:0048364 IEAPLAZA Tree-based Orthologyroot developmentAT4G32880
GO:0009733 IEAPLAZA Tree-based Orthologyresponse to auxinAT4G32880
GO:0009855 IEAPLAZA Integrative Orthologydetermination of bilateral symmetryAT2G34710
GO:0009955 IEAPLAZA Integrative Orthologyadaxial/abaxial pattern specificationAT2G34710
GO:0009956 IEAPLAZA Tree-based Orthologyradial pattern formationAT5G60690
GO:0008284 IEAPLAZA Tree-based Orthologypositive regulation of cell proliferationAT4G32880
GO:0010087 IEAPLAZA Tree-based Orthologyphloem or xylem histogenesisAT1G52150

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0003677 IEAInterProDNA binding
GO:0008289 IEAInterProlipid binding
GO:0005515 IEAPLAZA Integrative Orthologyprotein bindingAT1G30490
GO:0003700 IEAPLAZA Tree-based Orthologytranscription factor activity, sequence-specific DNA bindingAT1G52150
GO:0043565 IEAPLAZA Tree-based Orthologysequence-specific DNA bindingAT5G60690
GO:0044212 IEAPLAZA Tree-based Orthologytranscription regulatory region DNA bindingAT5G60690

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005634 IEAPLAZA Integrative OrthologynucleusAT2G34710

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR023393START-like domain
IPR001356Homeobox domain
IPR013978MEKHLA
IPR002913START domain
IPR009057Homeobox domain-like

Mapman id Description
15.5.3.2.RNA biosynthesis.transcriptional regulation.Homeobox transcription factor superfamily.transcription factor (HD-ZIP III)
No SignalP domains detected for this gene.